Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0600 ATGAGTTATTGTCTTGTGTTGTTAATAGCTCCGACGATTGGTGCAGCAGGAGATCATGATGATGATGATTCAGGGTTACTCCTTGGAGGGAAGAAGTTGATAATTGGACTTCCTTATAATTCAGGCCACACCCAGTTTGTGGATATTCTACAACTCAATTCTGCTAATCACAATCAGGTCCTCCAGGTTAGGGGCTATTCTATTGATGTGTTCAATGCTACAATAGCCTACCTTAAGCGTTTACATCACAATATTTCCTTCGAGTTTAGAGCTTTCGTCGACAACGATGAAAGGGGTTCTGGGTATTACGACGCTCTTGTCCACCAGATTTCTAAAGAAAAGTATGATGCTGTGGTGGGAGACGTGACGATTTTGGAAAATCGGTGGAAGTATGCAGATTTTACGTTACCATATAAACACTCTAATGTGAAGATGCTTGTGAAAATTCGACATGATCCACGGTTGAATATGTGGATTTTTGTTCGACCGTTTAGTTGGAATCTTTGGTTGTCCATTGCTATCATCTCTACTTTTATAGGAGGTATCATACTATTCATGGAACGTAATGTCAAAAAAGATTCAACTCTTGAAAATTCATCATGTAGGCAACAATTCAGTGCGGTTTCTATCCTCTGGCTTCCTGTTGTGCAAGCAGTTTTTCCTGAAAGAGAATCATTGGCCAAGAACTGCTCTAGGTTTGTGCTGGTGATGTGGTTGATATTGGTATCTGTGCTCATGCAAAGCTACACAGCATGTTTGTCATCGATCTTAACGATACATCAGTTACAACCTCAATACCTTAGTGAGACCGATGTTTTAGAAGATCTCAACATTAACGTTGGATACAAAGATGGATCATTTGTGGGAGACTTGTTGGTCAATAACTTGATCAACGATAGGTCAAGGTTGAAGAACTACTCTTGCATCAAAGAATATAAGGAGGCTTTAGATAAAGGAAGCCGTAAAGGTGGCGTCGATGCTATTTTAGATGAAGCTCCCTACTTTAAGACCTTTCTCAAGCATTACGGCTCAAATAATTATGCCGTGGTTGGAACTAGGCACCATGCTGGTGGATTTGGTTTTGCATTTCGTAAGAACTCCACCTTAACACTGCACTTTTCTAAAGCCATATTAAATATTAGCGAGAGTAATGAAATGGACAACATTGAGGAGACATATTTTGGAGGTAGCAACGATGATAATGAAAACAAAGAGCTATCTAATTCATCATCATCAATAGATGCGAGTCCCAGTCTTACTGCTTACAGTTTTGCAGGTTTGTTCATGGTTATTGGAATTCTTTCAGTGTTAGCTTTAGCAGTCTCTGAAAGTCATATTTGGCGAAAACCTGTTCTACTCGCTAAGACTTATAGCCAACTATTTTTGAATCGGAGTTCTAAAAGAAGAATTAGGCCATTAGAGGAAGGTTCTACTACAAGAAATGTTGACAAACAATGTTCTCCAGACACACAAAATATTGGTGGGTCAGATAATAAAACATTGCCTCTGTAA 1512 0.3915 MSYCLVLLIAPTIGAAGDHDDDDSGLLLGGKKLIIGLPYNSGHTQFVDILQLNSANHNQVLQVRGYSIDVFNATIAYLKRLHHNISFEFRAFVDNDERGSGYYDALVHQISKEKYDAVVGDVTILENRWKYADFTLPYKHSNVKMLVKIRHDPRLNMWIFVRPFSWNLWLSIAIISTFIGGIILFMERNVKKDSTLENSSCRQQFSAVSILWLPVVQAVFPERESLAKNCSRFVLVMWLILVSVLMQSYTACLSSILTIHQLQPQYLSETDVLEDLNINVGYKDGSFVGDLLVNNLINDRSRLKNYSCIKEYKEALDKGSRKGGVDAILDEAPYFKTFLKHYGSNNYAVVGTRHHAGGFGFAFRKNSTLTLHFSKAILNISESNEMDNIEETYFGGSNDDNENKELSNSSSSIDASPSLTAYSFAGLFMVIGILSVLALAVSESHIWRKPVLLAKTYSQLFLNRSSKRRIRPLEEGSTTRNVDKQCSPDTQNIGGSDNKTLPL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0600 503 MobiDBLite consensus disorder prediction 479 503 - -
Lele17g0600 503 Gene3D - 158 294 - -
Lele17g0600 503 Pfam Ligand-gated ion channel 396 433 IPR001320 GO:0015276|GO:0016020
Lele17g0600 503 SMART GluR_14 32 396 IPR001320 GO:0015276|GO:0016020
Lele17g0600 503 SUPERFAMILY Periplasmic binding protein-like II 5 396 - -
Lele17g0600 503 MobiDBLite consensus disorder prediction 472 503 - -
Lele17g0600 503 Gene3D - 27 157 - -
Lele17g0600 503 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 449 - -
Lele17g0600 503 Pfam Bacterial extracellular solute-binding proteins, family 3 63 395 IPR001638 -
Lele17g0600 503 MobiDBLite consensus disorder prediction 392 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0600 Lele-ChrLele17 18098712 18101410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0600 30 441 Ion Channels AT2G29120 35.922 1.07e-64 224