Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0598 ATGGGAATCGAGAGGGGAAGCCTCAAGGGCTTTCGTACCAGCGGCTGGACCTTGCCGCCGAAGCCATGTGACTCTTGCAAATCGGCGGCCGCTGCAGTTTTCTGCCGAGCCGACTCAGCTTTTCTGTGCATGCTCTGTGACAACAAGATTCACTCCGCCAATAAGCTTGCTTCGCGGCATGAGCGTGTGTGGATGTGCGAGGTTTGCGAGCAAGCCCCTGCCTCCGTCACTTGCAAGGCTGATGCCGCCGCGCTCTGCGTCACGTGCGATTCTGATATCCATTCCGCCAATCCGCTGGCTCGCCGTCATGAGCGTGTCCCCGTGGAGCCCTTCTTTGATTCCGCTGACTCTGTGGCGAAAGCCTCCGCTGCTGCCTTTAACTTGTTGGTTCCAACTGATAACGGAATTGGATCCGATGGATTCCCTCAGGATGAATCCGAATCAGCATCATGGCTAATTTCCAATCCGAATTTCAACCCAAAGATCATGGATGTTCCGGATATCAAATCGGGCGATTTGTTTTTCCCGGAAATGGAGTATCCATTCCTGGATTTCGATTACCCAAACTCCTTCGATCAGAAAAACAATAACAGAGAGGGTCATAATAACGATAGCGTAGTTCCAGTTCAAGCTCAGGTTATGAATCACACAGAGAGTTGCTTCGACATCGAGTTCTGCAGATCGAAGCTCTCTTCAATTAGCTACCCAACGCAGTCGTTTAGTCGCCAAAGTGTTTCATCTTCTTCGGTTGACGTCGGAGTGGTCCCGGACGGAGGAAAAACGGTGTCGGAAATCTCGTTCCCGTTCGGCAGGCACATGAGTAACAGTTCGGAATCAAGCGGAATCATATCGGCCGGAAATTCCACAAACCAATCGGGAAGTTCGCTGAGTGGGGGTGGTATGAACCGGGAAGCTCGGGTTTTGAGATACAGAGAGAAGAGGAAGAACCGGAAGTTTGAGAAAACCATACGGTACGCTTCGCGAAAGGCTTATGCAGAAACTCGGCCGAGGATCAAAGGGCGGTTCGCCAAACGGACCGAGATGGTGTCGGACTTCGACCGGCTCTTCAGCTCGGTCGACCCCACCACAGATCTATTGCTCGATACTCAGTACGGCATCGTCCCCTCGTTTTAA 1134 0.522 MGIERGSLKGFRTSGWTLPPKPCDSCKSAAAAVFCRADSAFLCMLCDNKIHSANKLASRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSADSVAKASAAAFNLLVPTDNGIGSDGFPQDESESASWLISNPNFNPKIMDVPDIKSGDLFFPEMEYPFLDFDYPNSFDQKNNNREGHNNDSVVPVQAQVMNHTESCFDIEFCRSKLSSISYPTQSFSRQSVSSSSVDVGVVPDGGKTVSEISFPFGRHMSNSSESSGIISAGNSTNQSGSSLSGGGMNREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMVSDFDRLFSSVDPTTDLLLDTQYGIVPSF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0598 377 MobiDBLite consensus disorder prediction 278 302 - -
Lele17g0598 377 Pfam CCT motif 303 345 IPR010402 GO:0005515
Lele17g0598 377 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 22 358 IPR045281 GO:0009909
Lele17g0598 377 ProSiteProfiles CCT domain profile. 303 345 IPR010402 GO:0005515
Lele17g0598 377 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270
Lele17g0598 377 MobiDBLite consensus disorder prediction 278 299 - -
Lele17g0598 377 Pfam B-box zinc finger 63 108 IPR000315 GO:0008270
Lele17g0598 377 Pfam B-box zinc finger 21 62 IPR000315 GO:0008270
Lele17g0598 377 ProSiteProfiles Zinc finger B-box type profile. 23 65 IPR000315 GO:0008270
Lele17g0598 377 CDD Bbox1_BBX-like 22 65 - -
Lele17g0598 377 CDD Bbox1_BBX-like 66 108 - -
Lele17g0598 377 SMART bboxneu5 66 108 IPR000315 GO:0008270
Lele17g0598 377 SMART bboxneu5 18 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0598 Lele-ChrLele17 18042066 18043308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0598 1 377 C2C2-CO-like Transcription Factor Family AT5G57660 50.904 2.66e-111 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele17g0598 zf-B_box 4.7e-07 No_clan