Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0572 ATGTTCCCCGGGGCCCCTAAGTTTGAGGACTTCCTTGGCGGAGGCGCTGCCGCCGCCGCTCCAACAGCTCCCGCGCCTCCGCAGTTCTCTGCCGACAACACGCTGAGCACGGTGGTGGACAACGAGATATACGATTCAGAGCTGAAGACGATAGCCGCCAGCTTCCTTCGCGGCTTCGCTTCCGGAGGAGGGCAAGCCGAGCCGCAACAGAAACAGTCACAGCTGATTCCGGCAGAGCGGTCCTTGAAGAAGACCGTCGACACCTTCGGCCAACGCACCTCCATCTACCGCGGCGTCACACGGCATAGATGGACGGGAAGATACGAAGCTCATCTATGGGATAACAGTTGCAGGAGGGAAGGGCAAAGTCGGAAAGGAAGACAAGGTGGCTACGATAAGGAAGATAAGGCCGCCAGAGCTTATGATCTCGCCGCCCTCAAGTACTGGGGTCCGACCACCACCACCAACTTTCCGATTTCGAACTACCAGAAGGAACTAGAAGAGATGAAGAACATGACAAGGCAGGAGTTTGTTGCTTCTCTTCGAAGACATCACCAGCATGGCCGATGGCAGGCAAGAATAGGCAGGGTCGCCGGAAACAAGGACCTCTACCTTGGCACTTTCAGCACCCAGGAGGAAGCAGCGGAGGCGTATGATATAGCGGCGATAAAGTTCAGAGGAATAAATGCGGTGACCAACTTCGACATGAGTCGCTACGACGTTAAGAGCATTGCCAACAGCAGCCTTCCCATCGGTGGACTCTCCGGCAAGACCAAGAACTCAACAGATTCTTCTCCGTCCGACCGCCACGCCAAGAGCCCCAACGGAGCTCCATCCTCCGCCACAGACGACCGAGACCTCTCCTCAGTCACTTTTGCTTCCCAACAACCGCCGCCGCCGCCGCCGAGCTCTAACAATTCTCTCACATTCGCCATACCCATCAAACAAGACACTTTTTCAGATCATCATTACTGGTCCTCCGTTCTCGCCGGTTACAACAAAATTCCTTCCTTAACGATGCAACCATCTTCTTCCACCACCAATGGCTCAGTGACATCTGTCCTACCCTTTAACATGGACCTCTCTACTCCCCCCTCCAGTACGAGCAGTACTACTGAAGGCGGCAACAGCAACAATAATAATAATGGGTTTTTCAGTGGAGGCATGTTTGTTCAACAAAGTGGGAATAGTAATAATGGTGGTGGTAGTGGTGGTTCATCTTCTTCTGGTTCGAGTTCTTCATTGATGATCCCATTGGCCACGCCCATTGCTTTAAATAGTAACCCTAGTTATGAGAGCTCTCCTGGGTATGGAAACTGGAGCATCATTGGGTTTAAACATGCAGGGGTGGAGGAGGAGGAAGAAGATGATGATGATGGAGGTGAGAATGTGGGGAAGGGGTGA 1404 0.5313 MFPGAPKFEDFLGGGAAAAAPTAPAPPQFSADNTLSTVVDNEIYDSELKTIAASFLRGFASGGGQAEPQQKQSQLIPAERSLKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYQKELEEMKNMTRQEFVASLRRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGINAVTNFDMSRYDVKSIANSSLPIGGLSGKTKNSTDSSPSDRHAKSPNGAPSSATDDRDLSSVTFASQQPPPPPPSSNNSLTFAIPIKQDTFSDHHYWSSVLAGYNKIPSLTMQPSSSTTNGSVTSVLPFNMDLSTPPSSTSSTTEGGNSNNNNNGFFSGGMFVQQSGNSNNGGGSGGSSSSGSSSSLMIPLATPIALNSNPSYESSPGYGNWSIIGFKHAGVEEEEEDDDDGGENVGKG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0572 467 CDD AP2 183 237 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 MobiDBLite consensus disorder prediction 250 309 - -
Lele17g0572 467 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 61 340 - -
Lele17g0572 467 SUPERFAMILY DNA-binding domain 94 160 IPR016177 GO:0003677
Lele17g0572 467 CDD AP2 94 160 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 PRINTS Ethylene responsive element binding protein signature 217 237 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 Pfam AP2 domain 181 227 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 Pfam AP2 domain 95 150 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 MobiDBLite consensus disorder prediction 250 293 - -
Lele17g0572 467 MobiDBLite consensus disorder prediction 448 467 - -
Lele17g0572 467 MobiDBLite consensus disorder prediction 341 414 - -
Lele17g0572 467 ProSiteProfiles AP2/ERF domain profile. 174 235 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 ProSiteProfiles AP2/ERF domain profile. 95 158 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 SUPERFAMILY DNA-binding domain 183 237 IPR016177 GO:0003677
Lele17g0572 467 SMART rav1_2 95 164 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 SMART rav1_2 182 241 IPR001471 GO:0003700|GO:0006355
Lele17g0572 467 FunFam AP2-like ethylene-responsive transcription factor ANT 94 160 - -
Lele17g0572 467 Gene3D AP2/ERF domain 95 160 IPR036955 GO:0003700|GO:0006355
Lele17g0572 467 Gene3D AP2/ERF domain 180 237 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0572 Lele-ChrLele17 17864129 17867152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0572 42 342 AP2-EREBP Transcription Factor Family AT5G57390 62.840 1.11e-125 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele17g0572 AP2 5.4e-09 CL0081