Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0571 ATGGATTCGTCTTCAGAAGGTGCCACACTCAATCCATCTAAACGCAGCAAGTTGAGTATGGAAGAAAAAAGAGAACTTATCTACGAGATATCTAAGTCCCAGGGTGCACCAGAGATGTTACAGTCATGGAGCCGACAAGAGATTTTGAAAATCCTGTGTGCAGAGATGGGAAAAGAAAGGAAGTACACTGGGTTGAGAAAATTGAAAATCATAGAAAATCTTTTAAAAATTGTCTCTCAAAAGAAGTCAGGAGACCAGGAAATTACAACAGATCTTGAACCACTTTCTCCTCCTGCAAATGAGCAGAAACCAGCTAAAAGGCAGAGAAAAACAGAGAATCCATCTCGATTGCCTCCTCCAGCAAACAATGGTCTAATCACTAATGTTGATGAAAATTTAGGCGTAAATGATTTGCTCGGATGTTGTAGAAAACAACTGTCAATGGCAAAGTGTACCAGATGTGTGGACATTCTTTGCTATCGTGTCTCCTTGACCCAAAAACTTTTACAAGGGACTGAAAAGTATAATAAACTTTACGAAATAATTGATGAGGCTGTGAAGAAACTTGAACCTGAGGTTGGCCCATTAACTAACTCACCAGCGAAGATTGGCAGGGGAATTGTGAACAGACTTTCTTCAGGACCAGAGGTCCAGAAACTCTGTGGTTCTGGTTTGGAATCGCTGGATTCATCACTTTCTGAAATGCTCTCGTCTCCATCACCCAGTCCTACAGATCAAGATACAAAATCGGTTGCTTCAGATATGGTGGGATTTGAAGATGTCACTGCAACATCACTCACTGTAGTTTTGGGTTCTGAAAATCCATCTGGGGAGAATATTGTTGGTTACAGGTTGTGGCATCGTGCATCTCATGATGTGGACTATCCCTTGGACTCAACTAGCACATTGCCTCTACCAGACAGAAGGTTCACCATCAGGGATCTAATTCCAGCCACAGAATACATCTTCAAAGTTGCTGCCTTCAATCCTTCGAGGGAGCTGATTACGTGTGAAGCCCGTGTTTTGACTGAGCAAGGCGAGGAAGGAGCGCCCAACTGCTCAACAACAGAAAGAAGTCAGAGCCCAGTAACAAACTGTAGCAGCCTTTCCAATCCTTGTTCAGTAGAAGATGAAACTAATAACGGTAATCCGTATTGTGACCACCAGACCGATAACCTAGTGGAGAATTATCTTACTGATCAAAAGGACCCTGACAAGGTTGCTTCAGGAGTTTTATCCAATGACCCCACTAACTGTTCCAACATAGGTGAAGGTAGACCTCCAGCAGATGCTGATTCCTTATTAGACAAGGAACATGCTGTAGCAAAGACTGGCCCTTTACCTGGTTCTGATGTGTTAAAGCTTGAAGAAAAGCTCTCACCAGAGGAGCAAGTCACTGAGGACATGAGCACGGATAATGAGCGTAATTCGCCGGCTCAGGCTGGGTGGGCCTGTGTGTTATTAGCAGGTAGCTCAGAGGAAGGCCTTCCCATTACTCCATGCAAATTGGAAATGCTTAAGGATGAGCCAGGAAAAACGGGGAGGTCAAAATCCAGTGGTAAGGCCAAGGCCAAGGATCAAGAAAATGGGTCTGGGAAGAGACAATGCCCTCAAGACGGAAGCAAATCAAAGAAGAGAAAAATGGAAAGGCAACAGCAAATTGAAGAGTGTGATGCAGATGGGCTTTCTTCTGATGGGGATTTTGAGTATTATGTGAAGGTGATTAGACGGTTAGAGTGTGAAGGACATATAGAGAAGAACTTTAGGCAGAAATTTATGACTTGGTACAGCTTGAGAGCAACAGCCCAAGAAATTAGGGTTGTGAAAGTATATATTGATACATTTATTGAAGATCCAACATCTCTTGCAGAGCAGCTTGTGGACACTTTCTCAGACTGCTTATCAAGCAAGAGAACATCCATGGTGCCACCTGGGTTCTGCATGAAGCTTTTGCATTAA 1959 0.4339 MDSSSEGATLNPSKRSKLSMEEKRELIYEISKSQGAPEMLQSWSRQEILKILCAEMGKERKYTGLRKLKIIENLLKIVSQKKSGDQEITTDLEPLSPPANEQKPAKRQRKTENPSRLPPPANNGLITNVDENLGVNDLLGCCRKQLSMAKCTRCVDILCYRVSLTQKLLQGTEKYNKLYEIIDEAVKKLEPEVGPLTNSPAKIGRGIVNRLSSGPEVQKLCGSGLESLDSSLSEMLSSPSPSPTDQDTKSVASDMVGFEDVTATSLTVVLGSENPSGENIVGYRLWHRASHDVDYPLDSTSTLPLPDRRFTIRDLIPATEYIFKVAAFNPSRELITCEARVLTEQGEEGAPNCSTTERSQSPVTNCSSLSNPCSVEDETNNGNPYCDHQTDNLVENYLTDQKDPDKVASGVLSNDPTNCSNIGEGRPPADADSLLDKEHAVAKTGPLPGSDVLKLEEKLSPEEQVTEDMSTDNERNSPAQAGWACVLLAGSSEEGLPITPCKLEMLKDEPGKTGRSKSSGKAKAKDQENGSGKRQCPQDGSKSKKRKMERQQQIEECDADGLSSDGDFEYYVKVIRRLECEGHIEKNFRQKFMTWYSLRATAQEIRVVKVYIDTFIEDPTSLAEQLVDTFSDCLSSKRTSMVPPGFCMKLLH 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0571 652 ProSiteProfiles Fibronectin type-III domain profile. 251 359 IPR003961 GO:0005515
Lele17g0571 652 Pfam Fibronectin type III domain 257 329 IPR003961 GO:0005515
Lele17g0571 652 MobiDBLite consensus disorder prediction 86 126 - -
Lele17g0571 652 Gene3D Immunoglobulins 228 336 IPR013783 -
Lele17g0571 652 SMART FN3_2 250 334 IPR003961 GO:0005515
Lele17g0571 652 MobiDBLite consensus disorder prediction 1 15 - -
Lele17g0571 652 SUPERFAMILY Fibronectin type III 258 330 IPR036116 GO:0005515
Lele17g0571 652 MobiDBLite consensus disorder prediction 505 556 - -
Lele17g0571 652 PANTHER VIN3-LIKE PROTEIN 2-RELATED 135 652 IPR044514 GO:0010048|GO:0040029
Lele17g0571 652 MobiDBLite consensus disorder prediction 346 366 - -
Lele17g0571 652 MobiDBLite consensus disorder prediction 231 250 - -
Lele17g0571 652 MobiDBLite consensus disorder prediction 1 21 - -
Lele17g0571 652 MobiDBLite consensus disorder prediction 404 432 - -
Lele17g0571 652 MobiDBLite consensus disorder prediction 348 366 - -
Lele17g0571 652 CDD FN3 256 329 IPR003961 GO:0005515
Lele17g0571 652 MobiDBLite consensus disorder prediction 503 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0571 Lele-ChrLele17 17847398 17851463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0571 136 381 PHD Gene Family AT4G30200 52.453 2.82e-72 243