Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0569 ATGGCATACTCTTTGCCTTCTCAGAATCCTTGTTCCAATGCATATGGCAACTTCAAGCAACAGAAGCGGAAAGTTAATTTTCTTCTGCTTCCCGTTGCTATGCCTGTGATGGCTTTTTGGAATCAAAGACTTGGTCAAAGATTACCCTTCAAGGGTGGACTTGGTCAAAGAAGCTCATCTAAAATTTTGACAACAAATATGAGTTTTGTGTTTTCTCCACCTTCGTTTCATAGTTCATACGATGATTTTCAGACACAAGCTCAAAATACGTTCGATAAATTCGATGACAGTGTTAATTCTACCATGAAATGGGCAGTGGCTGAGTCTATTGTTTATGGGGTGGTGGTGATAATAGCCATTATAGCAATAGTATACGCCATTGTTGAGTGCTTGAAGAAAGCAGGATCAGTGATTCCAGCTTACACCCAGATTCCAACCACAGATAAAGCTTCAAATTCACATCCTTCAAACAACAAAGAAATTGAATTAGCAATTGCACCAGATTCACAAGTTCTGGAGTTTGCAACTATGGAAAGATTCCTCAACAACATCAACCAAGAGAAACCCATCAGATTCTCACCTGAGGAACTTGAAGAAATCACAAATAACTACACCACTGTTTTGGGGTCTGGTGCTTTTGGGGTGGTTTATGAAGGTGAATTGTCCAATGGAAAGCAAGTTGCAGTGAAAGTTCTTAACAGTTTGGATCTGGGCACAGAAGAACAATTCAAAGCAGAAGTTAGCACCATTGGAAGAACTTACCATATCAATTTAGTTATGCTTTATGGTTTCTGCTTCCACCGTGACAAGAGAGCTCTTGTATATGAGTTTGTTCAAAATGGGTCTCTCAACAATTTATTATTTGGCAGTCTGAACAGAGAAGTTGAGTTTGGTAAGCTTCATGAGATTGCGATCGGAACAGCGAAAGGACTTGCTTACTTACATGAAGAGTGTCAACATAGAATCATTCATTATGATATTAAGCCAGAGAACATACTTCTTGGCTTGAACTTGGAACCAAAGGTTGCAGATTTTGGTCTTGCAAAACTTTGCAGCAGAGAAAGCAGCCAAGTGAATATGACACACTTCAGAGGAACAAGAGGGTATGCTGCCCCAGAATTATGGAAGCTTTATCCTGTGAATCATAAGTGTGATGTTTATAGTTTTGGGATTGTTCTGTTTGAAATTGTGGGGAGGAGAAGGCATTTTGTTAGTGGTTGCAATGAATCACAACAATGGCTTCCAAAATGGACATGGGATATGTTTGAGAACAATGAATTACCAGTGATGATTTCACTGTGTGGAATTGAAGAGAAAGAGAGGGAAAAAGCACAGAGAATGTTAATGGTGGCTCTTTGGTGTGTTCAATATTGCCCTTCTGATAGACCTCTTATGAGTAATGTGGTGAAGATGTTGGAGGGTGATAGAGAAATCCCTCCACCTCCATTTCCATTTCAGAATTTGGTGTCTTCTAAACCACCTTTGACTTCGAAGGGAATCAAGGAAGATTCAGATGATTCTACTTCATGGGTGACTGAATCTTCTGAACAATCTAATTCTAAACCAGCCAACAATATATTCCATATAGAAAAATCTGCATAG 1602 0.3926 MAYSLPSQNPCSNAYGNFKQQKRKVNFLLLPVAMPVMAFWNQRLGQRLPFKGGLGQRSSSKILTTNMSFVFSPPSFHSSYDDFQTQAQNTFDKFDDSVNSTMKWAVAESIVYGVVVIIAIIAIVYAIVECLKKAGSVIPAYTQIPTTDKASNSHPSNNKEIELAIAPDSQVLEFATMERFLNNINQEKPIRFSPEELEEITNNYTTVLGSGAFGVVYEGELSNGKQVAVKVLNSLDLGTEEQFKAEVSTIGRTYHINLVMLYGFCFHRDKRALVYEFVQNGSLNNLLFGSLNREVEFGKLHEIAIGTAKGLAYLHEECQHRIIHYDIKPENILLGLNLEPKVADFGLAKLCSRESSQVNMTHFRGTRGYAAPELWKLYPVNHKCDVYSFGIVLFEIVGRRRHFVSGCNESQQWLPKWTWDMFENNELPVMISLCGIEEKEREKAQRMLMVALWCVQYCPSDRPLMSNVVKMLEGDREIPPPPFPFQNLVSSKPPLTSKGIKEDSDDSTSWVTESSEQSNSKPANNIFHIEKSA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0569 533 SMART serkin_6 202 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0569 533 Pfam Protein kinase domain 206 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0569 533 MobiDBLite consensus disorder prediction 483 533 - -
Lele17g0569 533 ProSitePatterns Protein kinases ATP-binding region signature. 208 230 IPR017441 GO:0005524
Lele17g0569 533 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 99 483 - -
Lele17g0569 533 FunFam Putative receptor-like protein kinase 278 479 - -
Lele17g0569 533 FunFam S-receptor-like serine/threonine-protein kinase 173 277 - -
Lele17g0569 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Lele17g0569 533 MobiDBLite consensus disorder prediction 510 527 - -
Lele17g0569 533 SUPERFAMILY Protein kinase-like (PK-like) 184 473 IPR011009 -
Lele17g0569 533 Gene3D Transferase(Phosphotransferase) domain 1 278 478 - -
Lele17g0569 533 ProSiteProfiles Protein kinase domain profile. 202 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0569 533 Gene3D Phosphorylase Kinase; domain 1 175 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0569 Lele-ChrLele17 17822787 17826067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0569 191 514 Receptor kinase-like Gene Family AT5G38280 41.742 8.72e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lele17g0569 Pkinase 2.2e-44 CL0016