Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0567 ATGTCGCCTGAATCGAGGACGAGACTGATCATTAGCTTGTGCACAAGTGTGCTTCCGCTCATAATAATGATTACCATATATATCTTTTACTGGAAAATATGTATGTACCAAAGGCGCAAACCAGCAAAAGTATCAGAACTTGAAAGTGGGAAGAACTCAGAGTTTCTAACATATAGAATGGATAAGTTTCTAAATGCCATGGAATCAGAAAAGCCAATCAGATTCACTTCACAAACCCTAATGCGTGCAACAAACAACTTCTCCAACATGTTGGGCTCAGGAGGTTTCGGATCAGTTTACAAAGGAACATTCAGTGATGGAACTGCTGTTGCAGTTAAAGTCCTACGTGGCATTTCTAATAAAAGAATGGAGGAACAATTCATGGCTGAAGTTGGTACTATTGGAAAAGTTCATCACTTAAACCTCGTTCGTCTCATTGGATTCTGCATAGAGAAGAACACGACAGCTTTAGTTTATGAGTACATGAGCAATGGTTCTCTTGACAAATATCTGTTTAGTGAACATAAAACCTTAGGATTTGAGAAACTTCATGAGATTGCTATTGGAACAGCCAAAGGAATTGCTTACTTGCATGAAGAATGCCAGGAGAGGATCATTCACTATGACATAAAACCAGAAAACATACTTTTGGATGATAATTTGCGTCCTAAAGTTGCTGATTTTGGTTTGGCAAAGCTTTGTAACCGAGACAAGTCTTATGTGACAATGACAGGTTTAAGAGGGACACCGGGTTATGCAGCACCGGAACTTTGGATGCCGTTTCGTGTGACTCACAAGTGTGATGTTTTCAGCTTTGGAATGTTGTTGTTTGAAATAATAGGAAGAAGAAGAAATCTTGATATGAACCTCGCAGAAAGTAGTAGTATAGAGTGGTTTCCAAGACAGGTTTGGATAAAGTTCGAGAGTGAGAATCTTCAAGAGCTGATAAATGATTGTGGTGTTACAGATGATAAAGAGGAGGAGAAAGTGGAAAGAATGGCGAAGATAGCATTTTGGTGTGTTCAGTATAGACCAGAATTGAGACCAATAATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCCATGGATGTTCCAAACCCTTCGAACCCATTTCAACATTTGATGGAAGAAAAAGAAGAAGATTATTCAATCAAAGCAGCACAAACGGATGATGTTTCATCTCTTGAGGTAACTGAACCTTCCATTCTCTCATCCTTTGTTGAGATCGATATAGATTCTATCCAAAATTAA 1251 0.3861 MSPESRTRLIISLCTSVLPLIIMITIYIFYWKICMYQRRKPAKVSELESGKNSEFLTYRMDKFLNAMESEKPIRFTSQTLMRATNNFSNMLGSGGFGSVYKGTFSDGTAVAVKVLRGISNKRMEEQFMAEVGTIGKVHHLNLVRLIGFCIEKNTTALVYEYMSNGSLDKYLFSEHKTLGFEKLHEIAIGTAKGIAYLHEECQERIIHYDIKPENILLDDNLRPKVADFGLAKLCNRDKSYVTMTGLRGTPGYAAPELWMPFRVTHKCDVFSFGMLLFEIIGRRRNLDMNLAESSSIEWFPRQVWIKFESENLQELINDCGVTDDKEEEKVERMAKIAFWCVQYRPELRPIMSVVVKMLEGSMDVPNPSNPFQHLMEEKEEDYSIKAAQTDDVSSLEVTEPSILSSFVEIDIDSIQN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0567 416 ProSiteProfiles Protein kinase domain profile. 85 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0567 416 FunFam Putative receptor-like protein kinase 162 366 - -
Lele17g0567 416 PANTHER OS07G0415500 PROTEIN 14 371 - -
Lele17g0567 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lele17g0567 416 Gene3D Phosphorylase Kinase; domain 1 59 161 - -
Lele17g0567 416 ProSitePatterns Protein kinases ATP-binding region signature. 91 113 IPR017441 GO:0005524
Lele17g0567 416 FunFam serine/threonine-protein kinase PBS1-like 57 161 - -
Lele17g0567 416 SUPERFAMILY Protein kinase-like (PK-like) 65 359 IPR011009 -
Lele17g0567 416 Gene3D Transferase(Phosphotransferase) domain 1 162 379 - -
Lele17g0567 416 PIRSF TyrPK_CSF1-R 172 282 - -
Lele17g0567 416 PIRSF TyrPK_CSF1-R 79 184 - -
Lele17g0567 416 PIRSF TyrPK_CSF1-R 10 86 - -
Lele17g0567 416 PIRSF TyrPK_CSF1-R 320 404 - -
Lele17g0567 416 SMART serkin_6 85 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0567 416 Pfam Protein tyrosine and serine/threonine kinase 87 358 IPR001245 GO:0004672|GO:0006468
Lele17g0567 416 CDD STKc_IRAK 91 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0567 Lele-ChrLele17 17813683 17815582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0567 74 395 Receptor kinase-like Gene Family AT5G38280 41.159 2.45e-79 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lele17g0567 PK_Tyr_Ser-Thr 8.6e-50 CL0016