Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0556 ATGCGCCACGAACTTCTGAGTCTTCAGTTAGGTTTTCACTTGTACTCGAGAAGAGTAGCCATGGGAATCTTCACCTTCGTCCTCCGTAAGTCAGGCGGCGAATGGACCGGCAAGCAGATCACTGGTGACATCGAGGCCTCTGCTCCCACCCCATTCGAGATCCAGAGGAAGCTTGTCCAATCTACCCTCGCTGTCGATTCCTCTGGGCCCGTTCAGTCCTCTTTCTCTTTCGTCTGCCCCGATTCTGCTGTCTTTCAGGTGGTTGTGGGTGGCGCCGTATTTGTTGGTGGTGGTGCTATAGCTGCTCCTGCTCCTGCTCCTGCAGCCGCAGCCGATGCTCCTGCAGCTGAAGCTAAGAAGGAAGAAAAGGTTGAAGAAGAGTCAGATGAGGATATGGGACTTGGACTTTTTGATTAG 417 0.5324 MRHELLSLQLGFHLYSRRVAMGIFTFVLRKSGGEWTGKQITGDIEASAPTPFEIQRKLVQSTLAVDSSGPVQSSFSFVCPDSAVFQVVVGGAVFVGGGAIAAPAPAPAAAADAPAAEAKKEEKVEEESDEDMGLGLFD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0556 138 MobiDBLite consensus disorder prediction 110 138 - -
Lele17g0556 138 Pfam 60s Acidic ribosomal protein 94 137 - -
Lele17g0556 138 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 21 138 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0556 Lele-ChrLele17 17688689 17689766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0556 21 88 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 61.765 7.55e-25 90.1