Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0548 ATGTCGCGCCACCGCCCTCCCATGAAGAAACCAATTTGGATAATTGTGCTGGTTTTATTTGTATGCGTGTTTCTAATTTTTGCTTACATCTACCCACCCAAAAACAGTTCAGCCTGTCATGTCTTTTCTTCCAGAGGTTGCGACATTATTTCTCAGTGGCTTCCACCTGTACCTGCAAGGGAATATACAGATGCAGAGATTGCATCACAATTGGTGATTAGGGATATTTTGAGTGCACCATATGTTCTTCCTAAAAATCCGAAAGTTGCCTTCATGTTTCTGACTCCTGGTTCCCTTCCATTTGAGAAATTGTGGGATAAGTTTTTCCAAGGTCATGAAGGGAAATTCTCAGTTTATGTGCATGCATCTAAGACTAGACCGGTTCATGTGAGCCGTTATTTTGTTAATCGGGATATACACAGTGAACAGGTGGTGTGGGGTAAGATTTCAATGGTTGATGCAGAGAGACGGCTATTGGCAAACGCTTTACAAGATCCCGATAATCAGCAATTTGTTTTACTTTCTGATAGTTGCGTGCCACTGTATAGTTTTGACTATATATACGACTATCTGATGTATACAAATATTAGCTTTGTGGACTGTTTTAAGGATCCTGGTCCTCATGGCAATGGTAGGTATTCAGAACATATGTTACCTGAAGTTGAGGTGAAGAATTTCAGAAAGGGTGCACAGTGGTTCTCAATGAAGAGACAGCATGCTATTATAGTTATGGCTGACAACCTGTATTACTCAAAATTCCGTGATTACTGCAAGCCTGGTCTTGAAGGGAAGAATTGTATTGCTGATGAACACTACATGCCAACCTTCTTCACTATTGTCGATCCCGGTGGAATCGCGAACTGGTCATTAACCCATGTGGACTGGTCCGAGAGAAAATGGCATCCAAAATCGTATAGGGCTCATGATGTCACGTACGAGCTTTTGAAGAACATTACGTCCATTGATGTTAGTGTGCATGTTACCAGTAATGCCAAGAAAGAAGTACAAAGTTGGCCTTGCTTATGGAATGGGATTCAGAAGCCATGTTACCTATTTGCTAGAAAGTTCACTCCTGAAACCCTGGACAATTTGTTGCTACTTTTTTCCAATTACTCCACTCCTTGA 1125 0.4133 MSRHRPPMKKPIWIIVLVLFVCVFLIFAYIYPPKNSSACHVFSSRGCDIISQWLPPVPAREYTDAEIASQLVIRDILSAPYVLPKNPKVAFMFLTPGSLPFEKLWDKFFQGHEGKFSVYVHASKTRPVHVSRYFVNRDIHSEQVVWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYSFDYIYDYLMYTNISFVDCFKDPGPHGNGRYSEHMLPEVEVKNFRKGAQWFSMKRQHAIIVMADNLYYSKFRDYCKPGLEGKNCIADEHYMPTFFTIVDPGGIANWSLTHVDWSERKWHPKSYRAHDVTYELLKNITSIDVSVHVTSNAKKEVQSWPCLWNGIQKPCYLFARKFTPETLDNLLLLFSNYSTP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0548 374 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 15 365 IPR044174 GO:0016757
Lele17g0548 374 Pfam Core-2/I-Branching enzyme 89 318 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0548 Lele-ChrLele17 17636307 17640305 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0899 21 6058067 6061906 Lele17g0548 17 17636307 17640305 CCT
Lele22g0900 22 6108012 6112098 Lele17g0548 17 17636307 17640305 CCT
Lele23g1152 23 17058979 17063012 Lele17g0548 17 17636307 17640305 CCT
Lele24g0873 24 5993335 5997321 Lele17g0548 17 17636307 17640305 CCT
Lele17g0548 17 17636307 17640305 Lele19g0990 19 6256809 6266229 hybridization
Lele17g0548 17 17636307 17640305 Lele20g0454 20 12228118 12231715 hybridization