Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele17g0545 | ATGAAAGTCTCTTTGCTTGATCCCACTTTTGATCGTCATCGGCGATTCTGCGATTTTATCATTTCGTCTTCTGGTGCCAGAGTCACTGATTCGGTGCCTTTGCGTGCTGTTTTTGGTTTGGACTGTATGCGAGTTGGAGCCAGCCGGATCCAAGCGACACTGTGCATCCTTATAGTTTTATCATCTCTTTTGGTTGCTGCAAAGGCAGAGATTTATATAGTAACTGTTGAAGGTGAACCTGTCATAAGTTACACTGGAGGTATTGATGGGTTTGAAGCCATTGCTGTGGAATCTGATGAGAATATTGATACCACAAGTGAATTGGTAACTGCTTATGCTCGTCACCTTGAGAATAAACATGATATGCTTCTTGGAATGCTGTTTGAACGGGGGACCTACAAGAAACTCTATACTTATAGTCATCTTATAAATGGGTTTGCTGTTCATATTTCCCCTGAACAGGCAGAAACCCTTAGACGTACTCCTGGAGTGAATTCTGTAGAGAGAGACTGGAAAGTAAAGAGACTTACAATACATACCCCCCAATTTTTGGGGCTTCCAACGGAGGTATGGCCAACAGGAGGTGGCTTTGACAGGGCTGGAGAAGACATCGTGATTGGCTTTGTAGACTCTGGGATCTATCCACACCACCCAAGCTTCGCCAGTCACATTACTGAACCATATGGACCGGTTCCTAGATATCGAGGAAAATGTGAAATTGATCCAGATACAAATAAGGACTTCTGCAATGGGAAGATTATTGGAGCACAACATTTTGCTCAAGCTGCGATAGCTGCTGGGGCATTTAATCCATCTATTGATTTTGCTTCTCCCCTAGATGGGGATGGGCATGGAAGTCATACGGCTGCTATAGCAGCTGGAAATAATGGAATTCCTGTGAGGATGAATGGGTATGAATTCGGGAAAGCAAGCGGAATGGCTCCCCGTGCAAGGATTGCTGTGTACAAGGCACTGTATAGACTTTTTGGAGGTTATATTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTGCATGATGGGGTGGATATACTGAGTCTTTCAGTTGGACCAAATAGTCCTCCAGCAACTACTAAAACCACATATTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCAGGTGTATTTGTTGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCTAAGACCTTAGTTTCATATAGTCCTTGGATAACTTCTGTGGCAGCTGCAGTTGATGATCGTAGATATAAGAACCATCTGACTCTCGGAAATGGAAAAATGTTAGCTGGAATTGGGCTGTCACCTTCCACACATCCAAACCAAACATACAAATTAGTTGCTGCCAATGATGTGCTGCTAGATTCTTCAGTTATGAAGTACAGCCCCACAGATTGCCAGAGAGCAGAAGTCTTAAACAAGAAATTGGTGGAGGGGAATATTCTTCTTTGTGGCTATTCTTTCAATTTTGTTTCTGGTACTGCATCAATAAAGAAAGTCTCTGAAACAGCCAAGGCCCTTGGTGCCGTTGGATTTGTTCTTTGTGTGGAAAATGTTTCTCCTGGAACAAAATTTGATCCAGTTCCCGTTGGCATCCCTGGGATTCTTATCACCGATGTCAGCAACACACAGGAGCTTATAGATTATTATAATATCTCTACACCAAGAGACTGGACGGGCCGGGTGAAGAGTTTCAAAGGTACAGGTAATATAGGGGATGGTTTGGTGCCTATTCTCCATAAATCTGCACCACAGGTGGCATTATTCTCTTCTCGGGGGCCAAATACAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTCTCCAAATGGAACTGATGAACCCAATTATGCAGGGGATGGATTCGCAATGATTTCTGGAACTAGCATGGCCGCACCCCATATTGCTGGGATAGCTGCTCTTATAAAGCAGAAGCATCCTCAATGGAGCCCTGCTGCTATTAAGTCATCTTTGATGACAACATCTTCCACTCTAGACAGAGCAGGAAGGCCTCTTCTATCACAGCAGAGTGCCGAGACAGAAGCTTTTAAGCTGGTCACGGCTACTCCTTTCGATTACGGGAGTGGACATGTTAATCCTAGAGCTGCCTTGGACCCTGGGCTCATATTTGATGCAGGATACCAAGATTACTTGGGGTTCTTGTGCACCACACCCGGCATCGATGTTAATGAGGTAAAGAACTTCACACACTCACCATGCAACAGTAGCATGGGCCACCCATCAAATTTCAATGCTCCATCAATCACAGTTGCCCATCTTGTGGGAACACGAACCATCACTCGCACCGTCACAAATGTTGCTGAGGAAGAAACCTATGTGATCACAGGCAGAATGGGACCAGCCGTTGCCATCGAAGTCAGCCCTCCAGCTATGACTATCAAACCAGGTTCGTCCCGAAAGTTCTCCGTGACACTCACTGTTCGCTCAGTGACACGAACCTATAGTTTTGGAGAGATTTTAATGAAAGGTAGCAGAGGGCACAAGGTAAGGATTCCTGTTATGGCCAATGGATACCCACGTTAG | 2595 | 0.4497 | MKVSLLDPTFDRHRRFCDFIISSSGARVTDSVPLRAVFGLDCMRVGASRIQATLCILIVLSSLLVAAKAEIYIVTVEGEPVISYTGGIDGFEAIAVESDENIDTTSELVTAYARHLENKHDMLLGMLFERGTYKKLYTYSHLINGFAVHISPEQAETLRRTPGVNSVERDWKVKRLTIHTPQFLGLPTEVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFASHITEPYGPVPRYRGKCEIDPDTNKDFCNGKIIGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTAAIAAGNNGIPVRMNGYEFGKASGMAPRARIAVYKALYRLFGGYIADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTYLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWITSVAAAVDDRRYKNHLTLGNGKMLAGIGLSPSTHPNQTYKLVAANDVLLDSSVMKYSPTDCQRAEVLNKKLVEGNILLCGYSFNFVSGTASIKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGIPGILITDVSNTQELIDYYNISTPRDWTGRVKSFKGTGNIGDGLVPILHKSAPQVALFSSRGPNTKDFSFQEADLLKPDILAPGSLIWAAWSPNGTDEPNYAGDGFAMISGTSMAAPHIAGIAALIKQKHPQWSPAAIKSSLMTTSSTLDRAGRPLLSQQSAETEAFKLVTATPFDYGSGHVNPRAALDPGLIFDAGYQDYLGFLCTTPGIDVNEVKNFTHSPCNSSMGHPSNFNAPSITVAHLVGTRTITRTVTNVAEEETYVITGRMGPAVAIEVSPPAMTIKPGSSRKFSVTLTVRSVTRTYSFGEILMKGSRGHKVRIPVMANGYPR | 864 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele17g0545 | 864 | Pfam | Peptidase inhibitor I9 | 72 | 174 | IPR010259 | - | |
| Lele17g0545 | 864 | Gene3D | Peptidase S8/S53 domain | 203 | 734 | IPR036852 | GO:0004252|GO:0006508 | |
| Lele17g0545 | 864 | Gene3D | - | 416 | 581 | - | - | |
| Lele17g0545 | 864 | Pfam | Fibronectin type-III domain | 766 | 858 | IPR041469 | - | |
| Lele17g0545 | 864 | PRINTS | Subtilisin serine protease family (S8) signature | 643 | 659 | IPR015500 | - | |
| Lele17g0545 | 864 | PRINTS | Subtilisin serine protease family (S8) signature | 201 | 220 | IPR015500 | - | |
| Lele17g0545 | 864 | PRINTS | Subtilisin serine protease family (S8) signature | 280 | 293 | IPR015500 | - | |
| Lele17g0545 | 864 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 170 | 721 | - | - | |
| Lele17g0545 | 864 | SUPERFAMILY | Protease propeptides/inhibitors | 133 | 173 | - | - | |
| Lele17g0545 | 864 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 206 | 217 | IPR023827 | - | |
| Lele17g0545 | 864 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 130 | 858 | IPR045051 | - | |
| Lele17g0545 | 864 | Gene3D | - | 738 | 861 | - | - | |
| Lele17g0545 | 864 | CDD | PA_subtilisin_like | 423 | 561 | - | - | |
| Lele17g0545 | 864 | SUPERFAMILY | Subtilisin-like | 176 | 725 | IPR036852 | GO:0004252|GO:0006508 | |
| Lele17g0545 | 864 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 644 | 654 | IPR023828 | - | |
| Lele17g0545 | 864 | CDD | Peptidases_S8_3 | 177 | 680 | IPR034197 | - | |
| Lele17g0545 | 864 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 65 | 175 | IPR037045 | - | |
| Lele17g0545 | 864 | Pfam | Subtilase family | 201 | 682 | IPR000209 | GO:0006508|GO:0008236 | |
| Lele17g0545 | 864 | FunFam | Subtilisin-like protease SBT1.5 | 203 | 425 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele17g0545 | Lele-ChrLele17 | 17614404 | 17621476 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele17g0545 | 55 | 864 | Subtilisin-like Serine Gene Family | AT4G30020 | 80.665 | 0.0 | 1362 |