LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele17g0535	ATGGAGAACTTCGGCCACGAATTCAATCATTACTGGGAGACGCAAATGTTCTACCAAACAGAAGAGCTCGACAGCTGGGGACTGGACGAGGCAATTTCCGGCTACTACGACTCGAGCTCGCCGGACGGCAACGCTTCGTCGTCGACGGCCTCCAAGAACATCGTCTCGGAGAGGAATCGCAGGAAGAAGCTCAACGAACGGCTCTTCGCCCTCAGAGCAGTGGTTCCTAACATTAGCAAGATGGATAAGGCATCGATAATAAAGGATGCGATTGAGTACATTCAACACTTGCACGAACAAGAGAAAAGCATCGAAGCAGAGATAATGGAGCTTGAATCTGGGAAGAACATGAACATGAACATGATGATCAACAGCAACTATGGGAATCAGAATTCAAGCTTTGAATATGAGCAAGACCTGCCTGTGCTTCTCAGGTCCAAGAGGAACAAGACAGAGCAGCAGCAGCTTTTTGAGTCCGTCTGCTCAAGAAATCCCCCCATTGAAGTCCATGAGCTAAGAGTGACATACATGGGAGAGAAGACAGTAGTGGTGAGCTTGACGTGCGGGAAGAGGACAGACACAATGGTAAAGCTGTGTGAATTGTTTGAATCGTTGAAGCTCAAGATTATCACTGCCAACATCACTTCCTTCTCTGGCCTCCTCCTCAAGACCGTCTTCATTCAGGCGGATGAAGAAGAGAAAGATGTTGTACAGATAAAGATCCAAGCAGCCATTGCAGCTCTGAATGATCCTGAAAGCCCAATGAGCATGTAA	774	0.4767	MENFGHEFNHYWETQMFYQTEELDSWGLDEAISGYYDSSSPDGNASSSTASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQHLHEQEKSIEAEIMELESGKNMNMNMMINSNYGNQNSSFEYEQDLPVLLRSKRNKTEQQQLFESVCSRNPPIEVHELRVTYMGEKTVVVSLTCGKRTDTMVKLCELFESLKLKIITANITSFSGLLLKTVFIQADEEEKDVVQIKIQAAIAALNDPESPMSM	257

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lele17g0535	257	Coils	Coil	94	114	-	-
Lele17g0535	257	MobiDBLite	consensus disorder prediction	38	57	-	-
Lele17g0535	257	Pfam	Helix-loop-helix DNA-binding domain	55	98	IPR011598	GO:0046983
Lele17g0535	257	SMART	finulus	54	103	IPR011598	GO:0046983
Lele17g0535	257	PANTHER	TRANSCRIPTION FACTOR SCREAM2-RELATED	40	243	-	-
Lele17g0535	257	FunFam	Basic helix-loop-helix (BHLH) DNA-binding superfamily protein	44	115	-	-
Lele17g0535	257	SUPERFAMILY	HLH, helix-loop-helix DNA-binding domain	47	113	IPR036638	GO:0046983
Lele17g0535	257	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain profile.	48	97	IPR011598	GO:0046983
Lele17g0535	257	MobiDBLite	consensus disorder prediction	38	54	-	-
Lele17g0535	257	Gene3D	-	42	114	IPR036638	GO:0046983

Showing 1 to 10 of 10 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele17g0535	Lele-ChrLele17	17526984	17532999	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele17g0535	6	228	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G57150	59.556	1.02e-81	243

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bHLH	Lele17g0535		HLH	4.4e-12	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Lele17g0535	17	17526984	17532999	Lele21g0900	21	6063082	6063898	CCT
Lele17g0535	17	17526984	17532999	Lele23g1151	23	17056993	17057805	CCT
Lele17g0535	17	17526984	17532999	Lele19g1006	19	6365965	6371676	hybridization
Lele17g0535	17	17526984	17532999	Lele20g0441	20	12094710	12102411	hybridization

Showing 1 to 4 of 4 entries