Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0534 ATGGCTTCTGCAAGTGATGGCGGGAACTGGAAGTTCTTCTTCCCCTACCTCTCCTTCGTCTTCGCCATTCTTTTCTTCACTCATTCCCATTTCGCTACCAAACTCTTCCTCGGCAATGAAACGGTGCGTATCAAGAAGACTCCGGATCTCCCACTCCGGTTCCGTTCCGATGGTACCTTCAAAATCCTCCAGGTGTCTGATATGCATTTTGGAAGTGGCATCATAACAAGTTGCCGAGATGTGTTGGATTCTGAGTTCCAGTATTGTTCCGATCTTAACACGACGCGGTTTCTGGAGCGCTTGATTGAGGCTGAGAAACCTGATTTTATTGCCTTTACTGGTGATAATATATTTGGGTCAAGTACCACTGATGCTGCAGAGTCTATGTTTAAAGCCTTTGGCCCTGCCATGGACTCAGGACTTCCTTGGGCAGCAGTTCTTGGAAACCATGACCAAGAATCAACTATGAATCGTGAAGAATTAATGTCTTTAATCTCCCTCATGGATTATTCAGTCTCGCAAGTCAATCCATGGATGGATGGTCTCTCTAATCCTACCCAAGATGGCATGACAAGTAATATTGATGGCTTTGGCAATTATCACCTCAGAGTTTATGGTGCCCCAGGCTCCCCATTGGCAAATAGCAGCATTATGAATCTCTACTTTCTTGACAGTGGAGACAGGGCTGTTTATCAGGGCAAGCGAACTTATGGATGGATCAAAGAGTCTCAGCTTAATTGGCTTCGTAATGTTTCTATAGAATTTCAGGCACAAAAGCAAGATCCTCTTCCCTTTTCTGATGCATTTCCACCTCCTGCACCTCCAGCGCTTGTGTTTTTCCATATCCCAATCCCAGAAATTTGGCAGCTGTTCTACAAAGAGATTGTTGGTGAATTTCAAGAAAGTGTCGCATGTTCATCGGTGAATTCAGGAGTCTTGAAGACCTTTGTTTCCATGGGAGATGTGAAGGCTGTGTTTATGGGCCATGACCACAAAAATGACTTCTGCGGAAACTTGGACGGTATCTGGTTTTGTTATGGTGGTGGCTTTGGCTACCATGCGTATGGAAAAGCCGGGTGGCCCAGGAGAGCAAGGATCATTCTGGCTGAACTTCAGAAGGGACAAAGCTCCTGGATGGGTGTAGAGAAAATCAGGACGTGGAAACGTCTTGATGATGAGAAGCTTAGCAGGATTCACGAACAAATTCTCTGGGATTCACGGCTTTATTAG 1230 0.4545 MASASDGGNWKFFFPYLSFVFAILFFTHSHFATKLFLGNETVRIKKTPDLPLRFRSDGTFKILQVSDMHFGSGIITSCRDVLDSEFQYCSDLNTTRFLERLIEAEKPDFIAFTGDNIFGSSTTDAAESMFKAFGPAMDSGLPWAAVLGNHDQESTMNREELMSLISLMDYSVSQVNPWMDGLSNPTQDGMTSNIDGFGNYHLRVYGAPGSPLANSSIMNLYFLDSGDRAVYQGKRTYGWIKESQLNWLRNVSIEFQAQKQDPLPFSDAFPPPAPPALVFFHIPIPEIWQLFYKEIVGEFQESVACSSVNSGVLKTFVSMGDVKAVFMGHDHKNDFCGNLDGIWFCYGGGFGYHAYGKAGWPRRARIILAELQKGQSSWMGVEKIRTWKRLDDEKLSRIHEQILWDSRLY 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0534 409 Gene3D - 58 385 IPR029052 -
Lele17g0534 409 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 28 406 - -
Lele17g0534 409 FunFam Probable inactive purple acid phosphatase 29 59 382 - -
Lele17g0534 409 PIRSF Ptase_At2g46880 14 404 IPR011230 -
Lele17g0534 409 SUPERFAMILY Metallo-dependent phosphatases 59 371 IPR029052 -
Lele17g0534 409 CDD MPP_Dcr2 58 356 - -
Lele17g0534 409 Pfam Calcineurin-like phosphoesterase 60 332 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0534 Lele-ChrLele17 17506586 17509042 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0534 17 17506586 17509042 Lele21g0899 21 6058067 6061906 CCT
Lele17g0534 17 17506586 17509042 Lele22g0900 22 6108012 6112098 CCT
Lele17g0534 17 17506586 17509042 Lele23g1152 23 17058979 17063012 CCT
Lele17g0534 17 17506586 17509042 Lele24g0873 24 5993335 5997321 CCT
Lele17g0534 17 17506586 17509042 Lele19g1007 19 6391341 6393767 hybridization