Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0528 ATGTTAGTATTTAACTTCATTTCTGAAACTTTGCCGTTGCCGGAACACAAACCACTTCATTCTACCGCCAAGGCACCAACTCCGATGGGTGGAGAGGATGTTAAAGCAGTTGTTCCTGAGTCTGTATTGAAGAAGCAGAAGAGAAGCGAGGAATGGGCTCTGGCCAAAAAGCAGGATCTTGAAGCGGCCAAGAAAAAGAGATCTGAAACAAGGAAACTAATTTTTAACAGGGCGAAACAGTATGCAAGGGAATATGACGAGCAGCAAAAGCAGTTGATTAGATTGAAGCGTGAAGCAAAGCTTAAGGGCGGATTTTATGTCGACCCAGAAGCCAAGCTCTTATTCATCATCAGGATCCGTGGTATCAATGCTATGGACCCCAAAAGTAGGAAGATTTTGCAGCTTCTGCGTCTGCGACAGATATTTAATGGTGTCTTTCTCAAAGTTAACAAAGCCACTATGAATATGCTGAACAGGGTTGAGCCTTATGTTACTTATGGGTACCCTAATTTAAAAAGTGTAAAGGAACTGATCTACAAGAGGGGTTTTGGGAAAGTTAATAAGCAGAGAATTCCCTTGACTGACAACTCCATCATTGAACAGAGTTTGGGTCAACATGGGATTATTTGCATGGAAGATTTGATCCACGAGATCATGACCGTTGGACCTCACTTCAGGGAGGCGAATAACTTCCTGTGGCCTTTCAAGCTAAAGGCTCCACTAGGTGGTTTGAAGAAGAAAAGGAATCATTATGTTGAAGGAGGTGATGCTGGCAACCGTGAAGATTATATTAATGAGCTCATTAGAAGGATGAACTAG 819 0.4249 MLVFNFISETLPLPEHKPLHSTAKAPTPMGGEDVKAVVPESVLKKQKRSEEWALAKKQDLEAAKKKRSETRKLIFNRAKQYAREYDEQQKQLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLKVNKATMNMLNRVEPYVTYGYPNLKSVKELIYKRGFGKVNKQRIPLTDNSIIEQSLGQHGIICMEDLIHEIMTVGPHFREANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREDYINELIRRMN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0528 272 CDD Ribosomal_L7_archeal_euk 113 272 IPR035808 -
Lele17g0528 272 PANTHER 60S RIBOSOMAL PROTEIN L7 36 272 IPR039699 -
Lele17g0528 272 TIGRFAM uL30_euk: 60S ribosomal protein uL30 39 272 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lele17g0528 272 FunFam 60S ribosomal protein L7 218 272 - -
Lele17g0528 272 FunFam 60S ribosomal protein L7 113 217 - -
Lele17g0528 272 Pfam Ribosomal L30 N-terminal domain 38 109 IPR012988 -
Lele17g0528 272 ProSitePatterns Ribosomal protein L30 signature. 132 164 IPR018038 -
Lele17g0528 272 SUPERFAMILY Ribosomal protein L30p/L7e 113 272 IPR036919 -
Lele17g0528 272 Coils Coil 78 102 - -
Lele17g0528 272 Pfam Ribosomal protein L30p/L7e 114 164 IPR016082 -
Lele17g0528 272 Gene3D - 219 272 IPR036919 -
Lele17g0528 272 Gene3D - 113 218 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0528 Lele-ChrLele17 17437245 17439391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0528 29 272 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 83.197 1.33e-154 429