Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0515 ATGGAAGATGATGGAACGATATGCAACACAAGGCTGAGTCTAGGGCTTGGATTAGGAGGTTATGTGATGCCACTAAAGAAGCAGAAGTTTGAAGAAGCCATTATTCATGATAATCATCAGAAAGAATTTATCAGTTTGAAGACCAGATCAATCGATGATGATGAAGAAGATGAAAAGAGCGATCATAGCAGAAATAGTTGCAGAAAGAAAATGAGACTCACCAAGGACCAGTCCTCCATGCTTGAAGATAGCTTTAAGCTCCATAGCTGTCTCAACCCATTCCAGAAACAAGAACTTGCTCAGCGATTGAATTTGAAGCCCAGACAGATCGAAGTTTGGTTTCAAAACAGAAGAGCGAGGAAAAAGTTGAAGCAAACGGAGGTAGATTGCGAGTTACTGAGAAAATGCTGTGAAAACCTAAGAAACGAGAACAGAAGGTTGAAGAAAGAAGTTGAAGAACTACGTGCTCTGAAAGTTGAAGCGTTGTCGTCGTCGTCTTCATCACCACCACCATTAATTTTAGCAGGAAGCAGTAATAACATTAATAACAGTATTCAAAAACTCTCAAGAGCAGCGACACTTGCTCTGTGTTCATCTTGTGAGAAGCCATTAATCAAAGGCCATTAA 627 0.4019 MEDDGTICNTRLSLGLGLGGYVMPLKKQKFEEAIIHDNHQKEFISLKTRSIDDDEEDEKSDHSRNSCRKKMRLTKDQSSMLEDSFKLHSCLNPFQKQELAQRLNLKPRQIEVWFQNRRARKKLKQTEVDCELLRKCCENLRNENRRLKKEVEELRALKVEALSSSSSSPPPLILAGSSNNINNSIQKLSRAATLALCSSCEKPLIKGH 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0515 208 Coils Coil 123 164 - -
Lele17g0515 208 Pfam Homeobox associated leucine zipper 124 157 IPR003106 GO:0006355|GO:0043565
Lele17g0515 208 ProSiteProfiles 'Homeobox' domain profile. 64 124 IPR001356 GO:0003677
Lele17g0515 208 Gene3D - 59 129 - -
Lele17g0515 208 MobiDBLite consensus disorder prediction 51 73 - -
Lele17g0515 208 Pfam Homeodomain 68 122 IPR001356 GO:0003677
Lele17g0515 208 SMART HOX_1 66 128 IPR001356 GO:0003677
Lele17g0515 208 CDD homeodomain 68 125 IPR001356 GO:0003677
Lele17g0515 208 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 47 202 - -
Lele17g0515 208 SMART halz 124 167 IPR003106 GO:0006355|GO:0043565
Lele17g0515 208 ProSitePatterns 'Homeobox' domain signature. 99 122 IPR017970 GO:0000981|GO:0006355
Lele17g0515 208 SUPERFAMILY Homeodomain-like 58 125 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0515 Lele-ChrLele17 17327732 17328834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0515 51 202 Homeobox Transcription Factor Family AT4G37790 54.605 3.63e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele17g0515 Homeodomain 4.4e-16 CL0123