Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0507 ATGACTCACCTCTCTCCCCCAAAACGGCATAGCCATTTCTCTTTCACTCTTTCTCTCTCTACCTCTAACATTGGCACTCTCAAGCGGTACAGCAGTGACAGAATGGTGGTTCCTCACGGTGGATCCGGCGGAATCGGCGGTGGGGGTAGGTTAGAATCCATTTCTATAGTTCTATTGAACGAAGCTATGGCAGGAGTAGCACGAGTCAAATCAGAGCAAGTAATGGTATCCGATGAGGACACCGGTCGTTCGAGTTCTGGTGGCTACTGCGATGTCGAAGGTGAACCACACAACGACGTTTTCAGTGAGGTTTCGGGAAGGAAGAGCTCTCAAGTGACGGATGAGGAGTTTATTGAACCGGTTCCCGTCAAGCTTGAGGAACCGGGTGGAGCGGTGGGTGATGTGGATGGCGGTGCTGGAGCTGATGGGTCGTGTTATTCATCGCCAATCTTCTTGCCGAAACCGATGGAAGGGTTGAACGAGGTAGGCCCGACTCCGTTCCTGAAGAAGACCTTCGAGATGGTTGACGATCCGGTGACCGACCCGATTGTGTCCTGGAGTGAAGGTCGTGATAGCTTCATCGTTTGGGATTCCCATGAATTTTCCAAAATTCTTCTCCCTAAGTACTTCAAACACAGCAATTTCTCGAGCTTCATTCGCCAGCTTAATACATACGGATTTCGGAAGATTGATTCAGACCGTTGGGAGTTTGCGAACGAAGGATTTCAGGGTGGTAAGAAGCATTTGCTGAAGAACATTAGAAGGAGAAGCAAATATAACAAACTGCAACAAGGAGGAGCATTGACTTCCATGAAACCTGGCCTGGAGGCTGAAGTTGAGAAACTGAAGAAGGATCAGAACATACTGAAAGTGGAAATTCTGAAGCTGAGACAACAAGAAGAGACTTCACAGGTTCAGCTTGTAAATGTTCAAGAACGGGTTCGGTCTGCCGAGTTGAAGCAGTGCCAGATGATGTATTTCCTGACCAAAATGGCCAGAAGACCAACGTTGGTTCAGCAGTTAATCCAGAAGGTAAAGCGAAAAAGAGAGCTCAGTGGGGGCGAGATCAGTAAGCGACCCAGATTGCTTGGAACCCCTTGCCCTGTGAACTTCCCTAAGGCCATGGACACCAGTCCTGATGTTGATTATAGACAAGGTAATAAGGACTTGGCTTCTTTGCAATCAGAGCTCAATGGACTTTTGTCTGAAACAGTGAGCAATAGCAGAATGCAGCCTGCAGCCCCTTCTCCTCTGAGAGATGAACTGTGCAGTCCGGGATTAAGGACGAATGCTTCAAGAGCAAGTGGTAACGATGTATCTTCTGCGGCCTGCTGTATGATGTCAGAAAAACTGATGGAAGAGAACTCTGTTGTTGATGAGGGGCTTGATGTGAATGATTCAAATATCTATCTTGAATTGGAGGATTTGCTTAGCAAACCAACCGACTGGGTTGGATCTGCAAGTGGATTGGTGGGGCAAACTGGTTGCTGCAAGAGTGCGCCCACGCTTCACACAGATGCTGCTCCTGCTGCTGCTGCAACAGCAATGATGATGAGCAAATTGTATTTGGGCCCTGCGACATACCAACTTGAAAAGTGA 1599 0.4816 MTHLSPPKRHSHFSFTLSLSTSNIGTLKRYSSDRMVVPHGGSGGIGGGGRLESISIVLLNEAMAGVARVKSEQVMVSDEDTGRSSSGGYCDVEGEPHNDVFSEVSGRKSSQVTDEEFIEPVPVKLEEPGGAVGDVDGGAGADGSCYSSPIFLPKPMEGLNEVGPTPFLKKTFEMVDDPVTDPIVSWSEGRDSFIVWDSHEFSKILLPKYFKHSNFSSFIRQLNTYGFRKIDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLQQGGALTSMKPGLEAEVEKLKKDQNILKVEILKLRQQEETSQVQLVNVQERVRSAELKQCQMMYFLTKMARRPTLVQQLIQKVKRKRELSGGEISKRPRLLGTPCPVNFPKAMDTSPDVDYRQGNKDLASLQSELNGLLSETVSNSRMQPAAPSPLRDELCSPGLRTNASRASGNDVSSAACCMMSEKLMEENSVVDEGLDVNDSNIYLELEDLLSKPTDWVGSASGLVGQTGCCKSAPTLHTDAAPAAAATAMMMSKLYLGPATYQLEK 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0507 532 FunFam Heat shock transcription factor 1 160 257 - -
Lele17g0507 532 Pfam HSF-type DNA-binding 167 256 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele17g0507 532 ProSitePatterns HSF-type DNA-binding domain signature. 206 230 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele17g0507 532 Coils Coil 279 299 - -
Lele17g0507 532 SUPERFAMILY "Winged helix" DNA-binding domain 163 256 IPR036390 -
Lele17g0507 532 Coils Coil 383 403 - -
Lele17g0507 532 MobiDBLite consensus disorder prediction 76 115 - -
Lele17g0507 532 Gene3D - 160 257 IPR036388 -
Lele17g0507 532 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 153 384 IPR027725 -
Lele17g0507 532 PRINTS Heat shock factor (HSF) domain signature 218 230 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele17g0507 532 PRINTS Heat shock factor (HSF) domain signature 167 190 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele17g0507 532 PRINTS Heat shock factor (HSF) domain signature 205 217 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele17g0507 532 SMART hsfneu3 163 256 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0507 Lele-ChrLele17 17275197 17277544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0507 153 501 HSF AT2G26150 40.947 5.82e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele17g0507 HSF_DNA-bind 1.9e-31 CL0123