Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0506 ATGTGGCAGAGCGGAACACAGCCCGCCAGGCCCTCCTCCGACTCCGAGTTTCTCCTCCTCAATGGACCGTGTGGTCAGAGGCAGTTGGCGCCTAAGACTCAATTGGAGACTTCAAAACCTTCTGAAGTTTTAATGGCTTTTCCTCATTACCGTCGATCACATTTGAAGAGTAGAACTTTCCATACACTGGTTCGTATCCTATCCCACTGCAGCAATGAGTGCATTCTACCTGGCACCAATGGAAATCATGCTGCTTCTCAAGAGATACAAAATCATGACAATGGCGTCGATAGATTGCGGCAAGAGAGCCAGGGAAAGGAGCATGAGAACTTGCAATTTTCTGGTACTGATCTTATGAATCCCAAGCATCCTGTATCCCATAAGGGAAAACAGGTTCATGAGAGCTCCGATTGTAGGGAGTTTATGATGGGAGTAGAGGAAGATGTGGGCTCTACTGGAGGGCAGGATATGTTGATATGTGAAAGAGAAAGTGTTGAGGCCTTGTCCATGGGAACTAATGGTTTGAATAAGGAACAGAAGATAATAGACGAGTTAAATCAGATAGTGAAAGGAACTGAAAACCTGGTTGACAATGGCTCAATTCCTTTGAACTTGGGATCAGGTGTAAACCAGAATGGAAGCAGTGAAGTTGACTTGATGGATTACCAAGTAGAGTATGTTGAATTTAGAGGATCCGATCTCAACCCATCTGGAACTGAAAGTGAGTTATATAAAGAAGGAGAATTTAATCAAAAGATCTCCGAAGGCTTTGATGCATCTTTAATTGCTAAAGGTGAGTTTGAGAAGGAAGAACATGGTCAAAAGGTTCATGTGGCAACACAGCTATCTCTAGATGATGCTATGAAATATAGCGAACAGTTGAATTTGAGTATTGAGCTCGAGAGACTACAAAAGGAAATGGAGTTGGTGAAACCTGTTTCAGCTGCAGTTGTTTCTCCTCCTACTACTGAAGAGGGTAAGTTTGAGAAGGAAGAACAACATGGTCAAAAAGTATTTGAGGCTATGCAATTTTCTGTAGATCAGGTTATGAATAATGAAGAATCAAATTCAAGTGTAGAGCATGAGAAACAGAAAAGGGAAATAGACTCAGCAAAACCAGTTTGTGCCGCAATGATTTCTCTTCCTACCACCAAAGAGGGTGAGTTTGAGAAGGAAGAACAACATGGTCAAAAGGCTTCTGAAGCAATGCGTATTTCTGTAGATCAGGCTATGAAGAGTGAAGCATTGATTTCAAGCATAAAGCCCAATAGAAAACAAAAGGAAATGGAAATGGTGAAACCTGTTTCTGCTGCAATTGTTTCTCTTCCTACTACTGAAGATGGCGATTTTAAGAAGGAAGAACAACAGAGGAAAAGGATTCCTGAAGCAATGCAATTTTCTAAATATCAGGATATGAATAATGAAACATTAAATTCACATATAAAGCGTGAGAAACAACAAAAGGAAATGGACTCATCGAAACCAGTTTGTGCTGCAATTGTATCTCTTCCTACTACCAAAGAGGGTGAGTTTGAGAAGGGAGAACAACATGGTCAAAAGGTTCCTGAAACAATGCACATTTCTGTAGATCAGGCTATGGATAATGAAGCATTGATTTTAAATAGAAAGCCTAAAAGACAACAAAATGAAATGGAATTGGCAAAACCTGCCTGTGCTTCAATTGTTTCTCTTCCTGGTATTGAAGAGGATGAACTAGAGAAGGAAGAACATAATGGTAGTGATGGTTCCAAACCCACTAAGACATATGCAAGGAAGATTAAGAAGAGGGATTTGGGCCACTCGGGCTTGGACCCATCAGGTAGAATGGTCCCTGAAGCAATGCACTTATCTGTAAATCAGATGAACGGTGAAACATTGAATTCGGGCGAATGTAGTGAAGAGATGTCGTTCATGGACAGTGATAGTTTGGATGCTAAACATGTAAGACAGCATGATGAAGAGCAGCCAGAAAAGATAACTCACGCAAATGATGCAACATTTTCCAATCATCCGGATAAGGAAGAAGACATTGAAGAGGGAGAACTTTCAGGTGACTTTAGAATGGATGAGAATTCAATTGATTTGTCTTCTGCAGATTCTTTGATGATAGAACAGAGGAAACATGATGTACAAAAGCCCAAACATGTTATGGAAAATATAGTATTTCCTTTCAATATACATAAAGAAGAAAAAGAAAAAAAATATGAATCAACTCAAGATGCCTGTAACAGGGGACAAATGGAACCTACGAAAAGTGATAAAAATGTGTTTCCAAATGGAGTTGACCTTGGAATCTCTCGGGAAATTATTGATTATGGAGATTTAGTGGAGCATGGTTCTGTATTGGTGACTGGAAAAGGTGAAGACAGTGAAATTAAAGGGGCTGTTGGCTTGCCACCAACTTTAGCTAACAAAAAAGTTTTGCCCAAAGGTGTCTTGGAAGAAGAAGCCACTGAAGATCATCAAAACACATCTGCAGTAAAGAAAGCTGGCATCAGTTGTAAGAAAAAGCGTGGTCCTGTTACTGAGGAAAAGAAGGCCAAAAAGAAGGAAAAGAAAAGAAAGCAGCGGGCAGAGAAGAACAGAAAACTTGGTGTTAAAAGGTTGAAGTTGCAGCCAGTACAGAAACCAAAAACTATCACACATTGCCGCCATTATCTGAAGGGAAGGTGCCACGAGGGTGACAAGTGCAAGTTCTCACATGACATAGTGCCTCTGACAAAATCAAAGCCATGCTGTCATTTTGCTCGCCACTCTTGCATGAAAGGTGATGACTGTCCATTTGATCATGAGCTCTCCAAGTATCCTTGTAGCAATTTTGTGAATAAAGGTTCTTGCAGCAGAGGGAATGCTTGTATGTTTTCACACCAGATGCCAACCAAGCAAGATGTTGCTACATCTTCAAATGATAGCAAAGCTGAGTTGAAGCCTATACCGTTAGGAAATACAAAATTGAGTAAGCCACCTAACATCAGCAGCAGCAGTACTTCTCCGCAAAAACAGATCTCTGATTCAAAAGGAATTCAATGTCACCTCAATTCAGAAAAGGTGGTGGCAGACACCGTAAAGAAACCACTGTCAATGGCACCTAAAGGAATTAGTTTCCTCAATGTTTCAAAATCGTCATCTCCAAAACAAGTGATGGTAACTCCAAACAAGGAAAGTTCTGTTCAAATTGGGACCCTTACTGACCAAACTGCATCTGGCACAGCTTTAAACTCTATGAATCCTGAGAAAACGCCAGTGGTGGCACCTAAAGGAATTAACTTCCTTTCATTTGGAAAAGGTCATGTTTCCAGTTTCAAAAGTACTGTTTGCTCCTTTTTTAGTAAGGAAAATGGTATCAAGTTGTCTCACAAAGAAAGTTTAGGTACGCCTGAACAAGCATCTCTAGAGAAGGATGATTGCAGTAAAGTTGGCAGTGGGACAAAACAAAGTGTACCGCAGACTGCTGCATGCTCAAACAAGATTTTAAAGCAAAATCAATGTATGGCAGAGAAACTGGATTTGGTTTTTCTAGGAAAAGCTTCAATAGATCATTTCAGTAATGACGTACAATTTAGCTCAACCTCTCATCAGGATCACAGTCTTAGTAGATCAGTACAAGAGGGAATAAAGGCATATACTCGTCAGTCTTCAACTCTGACCTCATCTATGCTTCCAACTTCTTCATTTGTTTCAGGTCAATCTTCAGAACGCCTAGCATCTGGACATCATAAGCCCGTATTTAACTCAGCCCAGAGGGCACTGTTATCAACTCTATCATTTGCAGCAGAGCACGAGTCCAATATTAAGCTAAAGTCCCCTGTCGGTGCTTCATCTGTGAAATTAGAGATGAACAAGGATGTATAG 3852 0.4052 MWQSGTQPARPSSDSEFLLLNGPCGQRQLAPKTQLETSKPSEVLMAFPHYRRSHLKSRTFHTLVRILSHCSNECILPGTNGNHAASQEIQNHDNGVDRLRQESQGKEHENLQFSGTDLMNPKHPVSHKGKQVHESSDCREFMMGVEEDVGSTGGQDMLICERESVEALSMGTNGLNKEQKIIDELNQIVKGTENLVDNGSIPLNLGSGVNQNGSSEVDLMDYQVEYVEFRGSDLNPSGTESELYKEGEFNQKISEGFDASLIAKGEFEKEEHGQKVHVATQLSLDDAMKYSEQLNLSIELERLQKEMELVKPVSAAVVSPPTTEEGKFEKEEQHGQKVFEAMQFSVDQVMNNEESNSSVEHEKQKREIDSAKPVCAAMISLPTTKEGEFEKEEQHGQKASEAMRISVDQAMKSEALISSIKPNRKQKEMEMVKPVSAAIVSLPTTEDGDFKKEEQQRKRIPEAMQFSKYQDMNNETLNSHIKREKQQKEMDSSKPVCAAIVSLPTTKEGEFEKGEQHGQKVPETMHISVDQAMDNEALILNRKPKRQQNEMELAKPACASIVSLPGIEEDELEKEEHNGSDGSKPTKTYARKIKKRDLGHSGLDPSGRMVPEAMHLSVNQMNGETLNSGECSEEMSFMDSDSLDAKHVRQHDEEQPEKITHANDATFSNHPDKEEDIEEGELSGDFRMDENSIDLSSADSLMIEQRKHDVQKPKHVMENIVFPFNIHKEEKEKKYESTQDACNRGQMEPTKSDKNVFPNGVDLGISREIIDYGDLVEHGSVLVTGKGEDSEIKGAVGLPPTLANKKVLPKGVLEEEATEDHQNTSAVKKAGISCKKKRGPVTEEKKAKKKEKKRKQRAEKNRKLGVKRLKLQPVQKPKTITHCRHYLKGRCHEGDKCKFSHDIVPLTKSKPCCHFARHSCMKGDDCPFDHELSKYPCSNFVNKGSCSRGNACMFSHQMPTKQDVATSSNDSKAELKPIPLGNTKLSKPPNISSSSTSPQKQISDSKGIQCHLNSEKVVADTVKKPLSMAPKGISFLNVSKSSSPKQVMVTPNKESSVQIGTLTDQTASGTALNSMNPEKTPVVAPKGINFLSFGKGHVSSFKSTVCSFFSKENGIKLSHKESLGTPEQASLEKDDCSKVGSGTKQSVPQTAACSNKILKQNQCMAEKLDLVFLGKASIDHFSNDVQFSSTSHQDHSLSRSVQEGIKAYTRQSSTLTSSMLPTSSFVSGQSSERLASGHHKPVFNSAQRALLSTLSFAAEHESNIKLKSPVGASSVKLEMNKDV 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0506 1283 MobiDBLite consensus disorder prediction 985 1006 - -
Lele17g0506 1283 Coils Coil 175 195 - -
Lele17g0506 1283 MobiDBLite consensus disorder prediction 571 607 - -
Lele17g0506 1283 MobiDBLite consensus disorder prediction 962 1006 - -
Lele17g0506 1283 SMART c3hfinal6 878 903 IPR000571 GO:0046872
Lele17g0506 1283 SMART c3hfinal6 934 958 IPR000571 GO:0046872
Lele17g0506 1283 SMART c3hfinal6 906 932 IPR000571 GO:0046872
Lele17g0506 1283 Coils Coil 82 102 - -
Lele17g0506 1283 SUPERFAMILY CCCH zinc finger 877 902 IPR036855 GO:0046872
Lele17g0506 1283 MobiDBLite consensus disorder prediction 815 863 - -
Lele17g0506 1283 MobiDBLite consensus disorder prediction 1120 1145 - -
Lele17g0506 1283 ProSiteProfiles Zinc finger C3H1-type profile. 936 959 IPR000571 GO:0046872
Lele17g0506 1283 ProSiteProfiles Zinc finger C3H1-type profile. 906 933 IPR000571 GO:0046872
Lele17g0506 1283 Pfam CCCH-type zinc finger 882 902 IPR041367 -
Lele17g0506 1283 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 569 1280 IPR045124 GO:0003723|GO:0045892
Lele17g0506 1283 Gene3D - 832 907 - -
Lele17g0506 1283 Gene3D - 908 972 - -
Lele17g0506 1283 MobiDBLite consensus disorder prediction 649 684 - -
Lele17g0506 1283 ProSiteProfiles Zinc finger C3H1-type profile. 877 904 IPR000571 GO:0046872
Lele17g0506 1283 Coils Coil 841 861 - -
Lele17g0506 1283 MobiDBLite consensus disorder prediction 848 863 - -
Lele17g0506 1283 MobiDBLite consensus disorder prediction 102 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0506 Lele-ChrLele17 17263591 17269185 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele17g0506 zf-CCCH_4 9.9e-07 CL0537