Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0504 ATGCATATATATATACACGCGCTGTTTTTGTGTGATAGAGTTTCCTCTATCTTACATAGGTTTGTACTTACATTGATCTGGTTTGATTTTTCTAAGCAGTTGTTTGCTGTGTTTGAATGGATTGTTGAATGACTGGCTTTCAAGAACCCCATCTACCTTGAGCTGCAGCAACCAGATCTTCTAAGACTGGCATGGACACAAATACAGACACAATTTTATCAGGAAGCAAGGATTAAGACTGCTGTCTTCATGGGGCGCAACGATGGAGAAATGGAACTTGGCTTCCCAAACATGTCTCAAGATGATATTCAAACAGCGCTAAGGAATTGGTTCCCAGATGAATTTTCCAGATTACCGTCGTCATCATCAAATCAACAGCAGGCAAACATGGATCAGAGTCATCAGAATCCACCTTCATCATCTTCATCTTCATTAAGATCTCTCTCACTATCTGCAGGAAGCCCTGAATACTCATCCCTTCTGTTCATTCCGGGATCTTCTCCTCATTTTCCTCCTCCTCTTCAAGATCAATCCCTCACAACAGCTTCTTCTTCTAGCCTAATACACCAGCAAGTAGTCATCCAAGCTCTAGCTCAAGCCACTGCAGCACAGAGCCCATTTCCCACACCAGATACTGAAAATGATGCTATCATGAGAGCAATCCTTCATGTCCTTTCTACTAATAATGATTCACCTTCTTCTTCAGCCTCCCTTCATCATCATCAACAGAATTTGCATAATTATATGGTTCATCCTGAGACTAGTGCCTTCAAGAGGTACAACCCCATTATCCCCCAAATGGGACCTGCAGATCAATTGCGCAGGCAAAGTTTCTTCAAGAGGTCATTGACGTTCTTTAGAGGATTGAATTTCACGAGAATGAGAGAACGTATTCAAACAACTCGCCCCAGCACCACACAGCTTCATCACATGATTTCAGAAAGAAGAAGGCGTGAAAAGCTCAACGAGAACTTTCAGTCTCTTAGATCACTTCTTCCTCCTGGAACCAAGAAAGACAAAGCATCAATACTTACAACAGCGAAGGAAATACTGAGCTCGTTAATGGCGGAGGTAGAAAAGCTTAGAGAGAGAAACAAGCAGCTGGAGGCAGCAACAACATCGTCAACAATGGCGGCTGCTCCACCAGCTGTGAAAGAAGCCAGAGATTATGATGATCATGAAATCGTAAATGAAAGGTTAAATGTGAGAATCTCAGGCGAATTACCATCAGAATCAAGCTCGTCGGAAGAGAGAATGGTGGATTTGGAAGTGACGGTGAGGGGACAAAGTTCTCAAGTCGATATTCTGGTTCGATTACTGGGATTTCTGAAACAGGATCAAAATTTGAGCTTGATTTCCATGGAAGCTAACACGCATTTAGCTCACGCCACTTCCTTCAATCGAATCACCATAAGACTGAGGGTTGAGGGAAGTGAATGGGACGAATCTGCCTTCCAGGAAGCAATGAAAAGAGTGACTGCTGACCTGGCACAGTGA 1497 0.4315 MHIYIHALFLCDRVSSILHRFVLTLIWFDFSKQLFAVFEWIVEXLAFKNPIYLELQQPDLLRLAWTQIQTQFYQEARIKTAVFMGRNDGEMELGFPNMSQDDIQTALRNWFPDEFSRLPSSSSNQQQANMDQSHQNPPSSSSSSLRSLSLSAGSPEYSSLLFIPGSSPHFPPPLQDQSLTTASSSSLIHQQVVIQALAQATAAQSPFPTPDTENDAIMRAILHVLSTNNDSPSSSASLHHHQQNLHNYMVHPETSAFKRYNPIIPQMGPADQLRRQSFFKRSLTFFRGLNFTRMRERIQTTRPSTTQLHHMISERRRREKLNENFQSLRSLLPPGTKKDKASILTTAKEILSSLMAEVEKLRERNKQLEAATTSSTMAAAPPAVKEARDYDDHEIVNERLNVRISGELPSESSSSEERMVDLEVTVRGQSSQVDILVRLLGFLKQDQNLSLISMEANTHLAHATSFNRITIRLRVEGSEWDESAFQEAMKRVTADLAQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0504 498 MobiDBLite consensus disorder prediction 115 156 - -
Lele17g0504 498 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 66 495 IPR044658 -
Lele17g0504 498 Pfam Helix-loop-helix DNA-binding domain 309 354 IPR011598 GO:0046983
Lele17g0504 498 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 306 375 IPR036638 GO:0046983
Lele17g0504 498 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 305 354 IPR011598 GO:0046983
Lele17g0504 498 SMART finulus 311 360 IPR011598 GO:0046983
Lele17g0504 498 Coils Coil 344 371 - -
Lele17g0504 498 MobiDBLite consensus disorder prediction 114 182 - -
Lele17g0504 498 Gene3D - 304 378 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0504 Lele-ChrLele17 17243733 17248053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0504 42 497 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 40.825 3.22e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele17g0504 HLH 8.5e-11 No_clan