Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0501 ATGGCTCCGAGAATCCTACTATGCGGCGACGTCTTGGGCCGCCTGAACCAGCTCTTCAAGCGTGTTTCATCTGTCAATAAATCAGCTGGTCCATTCGATGCGCTTTTATGCGTGGGTCAATTCTTCCCGGAATCTCCGGACCAGGTGGACGAGTTCATGGACTATATTGAGGGTCGAACGCAGTTTCCTCTTCCTACTTACTTCATCGGCGACTATGGCATCGGTGCGCCTAAAGTTTTATTAGCAGCTTCTAAGGACCCGGCGAATCGTGGCTTCAAAATGGACGGCTTGAGGGTTTGCGATAATTTGTATTGGTTGAAAGGCAGTGGCAAATTCACCCTCTTGGGGTTATCTGTGGCATATTTATCGGGCAGACAAGCATCTGAGGCTCAACAGTTTGGAGTTTACGGTCAAGATGATGTTGATGCGTTGAGAGCAATAGCTGAGGAACCCGGAATAATCGACTTTGGGGTTACAAATAGAGCAAATGTTTCAGACATTCCTGCTGGACTATCAGATTCCATGGGGAGTGATTCAATCATAGCAGAGTTGGTGGGAGAGATTAAACCACGTTATCACATTGCAGGCAGTAAAGGTATATACTATGCCCGTGAACCTTATTCTAATATTGAAGCAGTGCATGTGACTCGATTCATAGGGCTTGCTACTGTTGGAAATAAAGATAAGCAGAAATTTATTCATGCAATTTCTCCCACGCCTGCATCCACCATGTCCTCAACTGAGATTGTCATGAAAACCACTAATACCACCTTATCGCCATATACATTTGTGGAGAAAGGAACTTCTCCAAAGGACACTGCAAAGAGATCCAGTGATAGTGTCTCTGATTCTCAATATTGGAGATATGATGTTTCCCAAAAGCGACAGAAACATGGAGCTGGAGATGGTGATAAATTGTGTTTTAAATTTTTGTCTTCTGGTTCTTGTCCAAGGGGAGAAAAGTGCAATTTTCGACATGATTTAGATGCAAGGGAACAGTATATTAGAGGTGTTTGTTTTGATTTTTTGAACAAAGGGATATGTGAAAGGGGTCCAGATTGCAACTTTAAGCACAGCTTGCAGGATGAAGGGGAGAATCATGCTGACAAGAGGCCAAGATCTCAAAATTCTAGCTCTAACAGATCAAAAGAGTGCTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTCACATTTGATCGCTAGCATTGGAGAAAATTACTATTGTGCGTTGGCTAAAGGTCCACTTGTTGAAGGCCATGTTCTGCTAATACCAGTTGAGCATTTGGCAAGTACATTATCACTGTCAACGGAATCTGAAGTTGAGCTTAGTAAATTCCAGAACAGTCTAAGGATGTACCACAAGAATCAAGGAAAGCAAGTCATCTTTTTTGAGTGGGTTTCCAGACGCACTAGTCATGCCAATCTTCAGGTTGTTCCTATTCCAACTTCCAAAGCATCACTGGTTGAAAAAATATTCAATTTAGCAGCAGAAAAGCTGGGATTTAAATTTTTGTCTAAGAAATTTGATAGCAATTTTGATGGAAGAAATTTTTTGAGGACACAATTTGATGGGAATTCAAGTTTGTTCTATGTTGAACTACCAGGAAGCGCAATATTGTTGCATCAGGTTGAAGATAATGAGAAATTTCCTGCCCAATTTGGTCGTGAGGTTGTATCAGGCTTGCTCAATATAGCGGATAAGGCAGATTGGAGGAATTGCAAATATAGCAAGGAGGAAGAAACAAAAATGGTTGAAGATTTTAAGAGCCGATTTCAAGAATTTGATCCAAACTGCTAA 1797 0.4179 MAPRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALLCVGQFFPESPDQVDEFMDYIEGRTQFPLPTYFIGDYGIGAPKVLLAASKDPANRGFKMDGLRVCDNLYWLKGSGKFTLLGLSVAYLSGRQASEAQQFGVYGQDDVDALRAIAEEPGIIDFGVTNRANVSDIPAGLSDSMGSDSIIAELVGEIKPRYHIAGSKGIYYAREPYSNIEAVHVTRFIGLATVGNKDKQKFIHAISPTPASTMSSTEIVMKTTNTTLSPYTFVEKGTSPKDTAKRSSDSVSDSQYWRYDVSQKRQKHGAGDGDKLCFKFLSSGSCPRGEKCNFRHDLDAREQYIRGVCFDFLNKGICERGPDCNFKHSLQDEGENHADKRPRSQNSSSNRSKECWFCLSSPNVESHLIASIGENYYCALAKGPLVEGHVLLIPVEHLASTLSLSTESEVELSKFQNSLRMYHKNQGKQVIFFEWVSRRTSHANLQVVPIPTSKASLVEKIFNLAAEKLGFKFLSKKFDSNFDGRNFLRTQFDGNSSLFYVELPGSAILLHQVEDNEKFPAQFGREVVSGLLNIADKADWRNCKYSKEEETKMVEDFKSRFQEFDPNC 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0501 598 FunFam Zinc finger CCCH domain-containing protein 59 361 487 - -
Lele17g0501 598 Pfam Protein similar to CwfJ C-terminus 1 376 492 IPR006768 -
Lele17g0501 598 SUPERFAMILY HIT-like 375 480 IPR036265 -
Lele17g0501 598 CDD MPP_CWF19_N 6 224 - -
Lele17g0501 598 ProSiteProfiles Zinc finger C3H1-type profile. 301 329 IPR000571 GO:0046872
Lele17g0501 598 SUPERFAMILY CCCH zinc finger 336 362 IPR036855 GO:0046872
Lele17g0501 598 Pfam Protein similar to CwfJ C-terminus 2 515 595 IPR006767 -
Lele17g0501 598 SUPERFAMILY CCCH zinc finger 305 330 IPR036855 GO:0046872
Lele17g0501 598 ProSiteProfiles Zinc finger C3H1-type profile. 333 361 IPR000571 GO:0046872
Lele17g0501 598 Gene3D - 359 497 IPR036265 -
Lele17g0501 598 Gene3D - 290 358 - -
Lele17g0501 598 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 597 IPR040194 -
Lele17g0501 598 SMART c3hfinal6 303 328 IPR000571 GO:0046872
Lele17g0501 598 SMART c3hfinal6 335 360 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0501 Lele-ChrLele17 17222431 17226574 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele17g0501 CwfJ_C_1 6.9e-38 CL0265