Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0473 ATGGGAATAGAGAAAAGCTTATGGTGTGGGTGTTTGGTGTTGTGGCTCTCTCTGCTTCTAACGGATCGAGTTCTGAGTTCTGAACATGACAACAAAACCTGTACATCTCGTTGCGGCATTATCACACACATCTCATACCCATTCCGATTACCACACGACCCAACCCACTGCGGCCACCGCAAATACGAGCTAGCCTGTGAAAACAACGTCACTCTCCTTCATTTACAATATGATTATGATTTGAAGAATGGAACATACCTGGATCTAGGAACATACAGAGTTCTCGGAATCAACTACACTAACTTCACAATCCGACTCGTAGATGCTGGAATTCAGAAGGCGAATTGCTCTTCCCTCCCTCTCCATTCCTTATCCCTTTCCAATTTCAACTCTTTAGAGTCTCCTTACAACAAGGATCACCAATATCGCAGTACACTAATCCCAGACTGCGACAGATTAAACAAGCATGTGGGGTACTTGAACTGCAGCGATCCAATAAGGGGGGACGCATCGTATGTGGATTCGGCTGCCTGCGTGAATTGGGAATCCAAAGGAGAAGGAGGAGTCCATGTTTATGCTGTGGCTGGGGACTTGCTTGCTGAGCAGTTTAAACCTCAATGTCGTCTGAAAATGGTGACCCCCATTGCTTCACATTGGGAATCATTGGTCCCTGGAGGAATAAAGTCTTATGCTGATATTCACACACTGATTTCCTTTGGATTTGAGCTTTCATGGTGGGAACGAGCTTGTGATTATCATAATTGTCCCCAAGGCACTGAATGCGGTTTCAGCCTTGAAACTCAAAGTCCGCAATGCTTTGGTCTATTTAAAATAGTGGGGAAGGAGGGTTCAGGAGCATACGGTGCCTCTACTCAATTTAGCAGAACAAATATTGGAAGACCATTAGGAAAAATCACTGGAAGATTTGTTTTGCCATTCATCACAGCCAGATTTTTAGTTGGTATCATATTCCTAATTGCTCTGTTGATTCATACATTCCGCAGAAGACACTTATCAATGTATGAAAACATTGAAGATTTCATACGACTTCACAACCTCCTTCCATTAAGGTACTCCTACAAGGATTTGAAGACAATCACTGAAGGATTCAAACACAAGTTAGGTCAAGGAGGCTTTGGCACTGTATACAAAGGGAAGCTCAAGAGTGGAATTGAAGTTGCTGTCAAAATGTTAGGTAATACCAAAGCTAATGGCCAGGAATTTATTAGTGAAGTGGCAACTATAGGAAGGATTCACCATTTTCATGTAGTCCACCTTGTTGGATTCTGTGTGGAGGGAACAAAGCGTGCTCTTCTCTATGAATTCATGCCCAATGGATCTTTGGATAAACATATTTTTTCCAAGGAAAAAAGTGTCTCCTTAAGTTATCACAAAATATATGAAATATCTTTAGGAGTGGCTCGTGGGATTGCTTATCTTCATCATGGGTGTGATATGCAAATATTGCATTTTGACATAAAACCTCATAATATTCTTCTTGATGACAACTTCACTCCTAAGATTTCAGATTTTGGGTTGGCAAAATTATATTCTGTTGACAATAGCATGGTGACTTTGACAGCAGCTAGAGGAACGATAGGATATATGGCTCCAGAGTTATTCTACAAGAATATTGGGAGAGTGTCTTACAAGGCTGATGTTTACAGTTTTGGAATGCTTTTGATGGAAATGACAAGCCAAAGAAGGAATTTGAATCCAAATACAGAGCATTCAAGCCAACTTTATTTTCCCTTGTGGATTTATGATCAATTTGATGAAGAGAGAGACATGGAGTTGGAAGATTTGACAGAAGAGGAAAATGATTTAGCAAGCAAAATGTTTATAGTAGCACTCTGGTGTATACAACTAAAGCCTATTGATAGACCTTCAATGAACAAAGTAATCGAAATGTTAGAAGTTGACGATGTTTCAAATCTTGAAATGCCTCCAAAACCTTCTCTATATCCAAATGAAACAGTTTTAGTGGATGATGGATCCAGCTCTTTCCAAACATCATCAGTTGTCTCTGAACGTTCTCATAGCAGTTCAGGTGAAGGCACAAGTAGTGGAAATTAA 2076 0.4041 MGIEKSLWCGCLVLWLSLLLTDRVLSSEHDNKTCTSRCGIITHISYPFRLPHDPTHCGHRKYELACENNVTLLHLQYDYDLKNGTYLDLGTYRVLGINYTNFTIRLVDAGIQKANCSSLPLHSLSLSNFNSLESPYNKDHQYRSTLIPDCDRLNKHVGYLNCSDPIRGDASYVDSAACVNWESKGEGGVHVYAVAGDLLAEQFKPQCRLKMVTPIASHWESLVPGGIKSYADIHTLISFGFELSWWERACDYHNCPQGTECGFSLETQSPQCFGLFKIVGKEGSGAYGASTQFSRTNIGRPLGKITGRFVLPFITARFLVGIIFLIALLIHTFRRRHLSMYENIEDFIRLHNLLPLRYSYKDLKTITEGFKHKLGQGGFGTVYKGKLKSGIEVAVKMLGNTKANGQEFISEVATIGRIHHFHVVHLVGFCVEGTKRALLYEFMPNGSLDKHIFSKEKSVSLSYHKIYEISLGVARGIAYLHHGCDMQILHFDIKPHNILLDDNFTPKISDFGLAKLYSVDNSMVTLTAARGTIGYMAPELFYKNIGRVSYKADVYSFGMLLMEMTSQRRNLNPNTEHSSQLYFPLWIYDQFDEERDMELEDLTEEENDLASKMFIVALWCIQLKPIDRPSMNKVIEMLEVDDVSNLEMPPKPSLYPNETVLVDDGSSSFQTSSVVSERSHSSSGEGTSSGN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0473 691 FunFam serine/threonine-protein kinase PBS1-like 338 442 - -
Lele17g0473 691 Gene3D Transferase(Phosphotransferase) domain 1 443 647 - -
Lele17g0473 691 PANTHER RUST RESISTANCE KINASE LR10-RELATED 341 662 IPR045874 GO:0004672
Lele17g0473 691 SMART serkin_6 368 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0473 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Lele17g0473 691 SUPERFAMILY Protein kinase-like (PK-like) 352 640 IPR011009 -
Lele17g0473 691 ProSiteProfiles Protein kinase domain profile. 368 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0473 691 MobiDBLite consensus disorder prediction 660 691 - -
Lele17g0473 691 CDD STKc_IRAK 374 639 - -
Lele17g0473 691 Pfam Wall-associated receptor kinase galacturonan-binding 34 108 IPR025287 GO:0030247
Lele17g0473 691 Gene3D Phosphorylase Kinase; domain 1 344 442 - -
Lele17g0473 691 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Lele17g0473 691 Pfam Protein kinase domain 371 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0473 691 MobiDBLite consensus disorder prediction 646 691 - -
Lele17g0473 691 FunFam PR5-like receptor kinase 443 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0473 Lele-ChrLele17 17004730 17007914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0473 13 655 Receptor kinase-like Gene Family AT5G38260 35.455 1.80e-113 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele17g0473 Pkinase 8.9e-47 CL0016