Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0462 ATGGAGGAAATATCTTCTAGTGTTGCAGTACCATTTACACTTGGCAAGTTGACTCAGGAGTCATCAGTAACAACAACCCACATGGAGATATCTGGGTTGAAGCTTATGGCTGCTAATACAGCAGCAGCTTTGATTTTGAATCCTGCAATGGAGGATTGTGAAAATCAAAGGGTTTGTTTAAGTTCACAGCATCAGATTACGGTATCTGCAGAAAAAAAGGAGAATCATGTTGCCGATGATGCCCTTGTTTCAGATTTGACTGACAGAACTTGGGTAGGGAATGAAACAACCAATCAGAAAAGCAAAAAAGTTGATTTTCAATGTCCAAATGATTCAAGCTCTCAATCTGTTGTTGCTGAGGACCAATCTTCAACTTTGAGGACTACTTGTTCAGAGATTGATCCGCCAATTAGTATTATCAAGATTGAAGATGATATGCAGAAAATGGTCTCTGTTGAAATGAATATTGAAATTTATGATGGAAGCGGATCAGATGGATGTGATTCTAAACCATCAGATTCACTTCTTGCAATATCAGAGGAGAAAGTATGCAGAAGAAGCTACCAGAATGGATTAGAAATGAATAGGGCTGCCCTTTGGGGATTTTCATCAATCTGTGGAAGAAGAGAAGAAATGGAAGATGCTATTGCAGTTGCTCAACTCTTGCAAGTACCTTCACAGATGCTAATGGAAAACCATGAGACTGAAAACCCAAAATACTCAGAAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGTTGCCAGGTTGCTAATTATTGCCGGGAACGTCTTCATTCAGTGTTGATTGAGGAGATAGAGGCTGCAGGAACGAGCTTGGGAGAAAACAATGAAGGAGACAACTGGCAGGACCAATGGAAGAAAGCATTCTGCAAGTGTTTTCAGAAAGTTGATGATGAGGTTGACGGAAAAAGTGAAGACAACAATGATGGATCAGAGTCTAGTTCAGAACCTCTTGCTCCTGAGACTGTTGGTTCTACTGCCGTGGTGGCCATTTTAAGTCAAACTCACATAATAGTAGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGCCGTGGAAAAGAAGCCATTCCGTTGTCTGCTGACCACAAACCAAATAGGGAGGATGAGTGGGAAAGAATAGAAGCTGCAGGAGGAAGGGTCATACAGTGGAATGGGTACAGACTTCTTGGGGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGATACCTGAAACCATGGATAATTCCTGAACCAGAACTACAGTTTATCCTGAGAGAGAAGAATGATGAGTGCCTTATTCTAGCCAGTGATGGTCTATGGGATGTGATGACAAATGAAGAAGCCTGCCAAGCTGCAAGAAACAGAATCCTTCTTTGGCACAAAAAGTATGGCAATGGCAATGGAAACAACAATGTATCTGCTAAACAAGAAGAAGAAGAAGGAGTTGATCCTGCAGCTCAATTTGCTGCAGAGTATCTTTCTAGACTTGCCCTTCAAAGGGGAAGTAAAGATAACATATCTGTTATTGTGGTTGACTTGAAGGTTCAAAGAAAAGTTAAGACAAGGGCATAA 1575 0.4146 MEEISSSVAVPFTLGKLTQESSVTTTHMEISGLKLMAANTAAALILNPAMEDCENQRVCLSSQHQITVSAEKKENHVADDALVSDLTDRTWVGNETTNQKSKKVDFQCPNDSSSQSVVAEDQSSTLRTTCSEIDPPISIIKIEDDMQKMVSVEMNIEIYDGSGSDGCDSKPSDSLLAISEEKVCRRSYQNGLEMNRAALWGFSSICGRREEMEDAIAVAQLLQVPSQMLMENHETENPKYSEAHFFGVYDGHGGCQVANYCRERLHSVLIEEIEAAGTSLGENNEGDNWQDQWKKAFCKCFQKVDDEVDGKSEDNNDGSESSSEPLAPETVGSTAVVAILSQTHIIVANCGDSRAVLCRGKEAIPLSADHKPNREDEWERIEAAGGRVIQWNGYRLLGVLAVSRSIGDRYLKPWIIPEPELQFILREKNDECLILASDGLWDVMTNEEACQAARNRILLWHKKYGNGNGNNNVSAKQEEEEGVDPAAQFAAEYLSRLALQRGSKDNISVIVVDLKVQRKVKTRA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0462 524 SUPERFAMILY PP2C-like 194 515 IPR036457 -
Lele17g0462 524 SMART PP2C_4 189 512 IPR001932 -
Lele17g0462 524 Pfam Protein phosphatase 2C 202 507 IPR001932 -
Lele17g0462 524 CDD PP2Cc 201 514 IPR001932 -
Lele17g0462 524 ProSitePatterns PPM-type phosphatase domain signature. 245 253 IPR000222 GO:0043169
Lele17g0462 524 PANTHER PROTEIN PHOSPHATASE 163 514 - -
Lele17g0462 524 FunFam Protein phosphatase 2C 51 192 522 - -
Lele17g0462 524 Gene3D - 187 524 IPR036457 -
Lele17g0462 524 ProSiteProfiles PPM-type phosphatase domain profile. 199 514 IPR001932 -
Lele17g0462 524 MobiDBLite consensus disorder prediction 309 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0462 Lele-ChrLele17 16915243 16919851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0462 89 523 PP2C-type Phosphatase Gene Family AT4G26080 50.685 1.61e-136 400