LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele17g0461	ATGAATAGAGGAAGCTTAGGCCCAAATCTCAAACTCACTGTTCCTGTTTCTGATCAGGTTTCTTTCGCCAAGTTCCTGACTGAGAGCGGGACCTTCAAGGAGGGGGATCTTCTCGTCAATAAGTATGGAGTTCGAATTATCTCTCAGAATGTAGTTGAAGCTCCACCCCCTATCAGGCCACTAGATAACCAGTTAAGTTTAGCAGACATAGACGCAATCAAAGTGGTCGGAAAGGGAAGTGGCGGTATAGTGCAATTGGTGCAGCACAAATGGACTAATCAGTTTTTTGCATTAAAGGTAATTCAAATGAATATTGACGAGTCTATGCGCAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCTCAATGTCCCTATGTTGTAGTCTGTTACCAGTCCTTCTATATAAATGGTGTTATATCCATCGTCTTAGAGTACATGGATGGAGGATCTCTGGAAGATTTTCTGAAGAAAGTGAAATCAATTCCAGAGGCATATCTTGCTGCCATGTGCAAGCAGGTGCTGAAGGGTTTAACATATCTTCACCATGAAAAGCATATTATTCACAGGGACTTAAAGCCTTCCAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGCGTTAGTGCAATCATGGAAAGTACATCTGGTCAAGCTAACACTTTCATTGGTACACGTATCTATATGTCTCCCGAGAGAATCAATGGATTCCAGCGTGGCTACAACTACAAATGTGACATATGGAGTTTGGGACTAATATTGCTTGAGTGTGCTACGGGGAGGTTTCCATATACGCCGCCCGACCAAGGAGAAAGATGGGAAAATGTTTTTCAGCTTATTGAAGCTGTTGTTGAAGCTCCTCCTCCCTCTGCCCCACCTGATCAATTTTCTCCAGAGTTTTGCTCATTTATATCGGCATGTTTGCAGAAAAATCCAAAGGATAGATTGTCAGCTCAAGAACTTATGAGACATCCATTTATCAGTATGTACGAGGACTTGGATGTGGATCTTTCAGCTTACTTCTCCAACGCAGGATCTCCCCTTGCTACTTTATAA	1071	0.4202	MNRGSLGPNLKLTVPVSDQVSFAKFLTESGTFKEGDLLVNKYGVRIISQNVVEAPPPIRPLDNQLSLADIDAIKVVGKGSGGIVQLVQHKWTNQFFALKVIQMNIDESMRKQIAQELKINQSAQCPYVVVCYQSFYINGVISIVLEYMDGGSLEDFLKKVKSIPEAYLAAMCKQVLKGLTYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTRIYMSPERINGFQRGYNYKCDIWSLGLILLECATGRFPYTPPDQGERWENVFQLIEAVVEAPPPSAPPDQFSPEFCSFISACLQKNPKDRLSAQELMRHPFISMYEDLDVDLSAYFSNAGSPLATL	356

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele17g0461	356	PANTHER	DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED	64	348	-	-
	Lele17g0461	356	FunFam	Mitogen-activated protein kinase kinase 6	40	149	-	-
	Lele17g0461	356	SMART	serkin_6	70	332	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele17g0461	356	Gene3D	Transferase(Phosphotransferase) domain 1	150	352	-	-
	Lele17g0461	356	Pfam	Protein kinase domain	73	332	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele17g0461	356	SUPERFAMILY	Protein kinase-like (PK-like)	68	338	IPR011009	-
	Lele17g0461	356	CDD	PKc_MAPKK_plant_like	68	336	-	-
	Lele17g0461	356	ProSiteProfiles	Protein kinase domain profile.	70	332	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele17g0461	356	ProSitePatterns	Protein kinases ATP-binding region signature.	76	99	IPR017441	GO:0005524
	Lele17g0461	356	FunFam	Mitogen-activated protein kinase kinase 6	151	351	-	-
	Lele17g0461	356	Gene3D	Phosphorylase Kinase; domain 1	53	149	-	-
	Lele17g0461	356	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	188	200	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele17g0461	Lele-ChrLele17	16907870	16912982	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele17g0461	27	354	MAP Kinase Kinase Gene Family	AT4G26070	66.163	2.03e-166	466

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE7	Lele17g0461		Pkinase	8e-70	CL0016