Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0460 ATGGGGGAAGAAGCCGTCATGGATGCTACTGAAGTGATCAGGCACCAAAATGGAAACAACAATGATCAAAGTCTTGAATTTGACGTATACCCTTTGAATGGCTACTACTTTGGCTCCAAAAATCCCATTCCCTTCAAGGACGAGACCTTGGCTGATCGTCTTCAGAGAATGAAATCTAACTATGCTGCTCATGGGATACGAAATTGTGTGGAAGCTGTCATGCTGGTTGAGTTGTTCAAACATCCACATTTGTTGATGCTGCAAGTAAGGAATTCCATCTTTAAACTCCCCGGTGGTCACCTAAGACCTGGCGAATCAGATATTGATGGATTAAAGCGTAAGCTGGCGAGGAAGCTAAATGTTGGTGAACATGGGGGTGGGGCTGAATGGGAGGTGGGCGAATGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACTTTACTGTATCCCTACTTGCCACCTAATGTGAAGAGTCCAAAGGAGTGCACGAAACTCTACCTTGTGAAGCTACCAGAGTCACGAAAGTTCATCGTGCCCAAGAATCACAAGCTGCTTGTAGTCCCATTGTGCCAAATTCATGATAATCACAAGACATATGGGACAATTATATCAGGGGTCCCCCAGCTGCTTTCAAAATTCTCATTCAACATGATTGAGACTTGA 663 0.4465 MGEEAVMDATEVIRHQNGNNNDQSLEFDVYPLNGYYFGSKNPIPFKDETLADRLQRMKSNYAAHGIRNCVEAVMLVELFKHPHLLMLQVRNSIFKLPGGHLRPGESDIDGLKRKLARKLNVGEHGGGAEWEVGECLGMWWRPDFETLLYPYLPPNVKSPKECTKLYLVKLPESRKFIVPKNHKLLVVPLCQIHDNHKTYGTIISGVPQLLSKFSFNMIET 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0460 220 Pfam Nucleotide hydrolase 27 213 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lele17g0460 220 SUPERFAMILY Nudix 71 178 IPR015797 -
Lele17g0460 220 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 22 219 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lele17g0460 220 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 26 217 - -
Lele17g0460 220 PIRSF CPSF-25 3 220 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lele17g0460 220 FunFam Pre-mRNA cleavage factor Im subunit 2 25 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0460 Lele-ChrLele17 16901988 16904838 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0460 17 16901988 16904838 Lele19g1082 19 7011820 7014603 hybridization
Lele17g0460 17 16901988 16904838 Lele20g0369 20 11468184 11471636 hybridization