Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0458 ATGTTGCCTGAATTAGCTGAAACAGAGTTGCAGAGGCACTTGGCGACAAAAAAAAATAAATTCAGGGATGGTTTGGTTTCATTTCCCAAGTTACCGAATCATTTCAGAACTTGTTCTGCTTCTAAGTTGTCTTGCATTGACTGTGGACAAATATTTGGGCAAGACACCGTTCAGCAGCACACACAATGTATGACAGAAATGGAAAAGTATGGTCCAAAAGGCCAAGGCAAAACTTTGAATGTTACAACTGCCAAACCTAACAGTAATAACAAGCAAAAGCCTGAAGTTGATATTAATGTTGGGTTATCAGAAAGGCCTCCGTGGTTTTGTAGGTATGTTCTATTGATTGCACTTTCTAACAACATAGTAGTTTGCAATCCCCTGTGGGTTGTGACTCAAGGGATCCTCTGCAACACAAAAGCTACGAGTAAGCAAACACTTCTTCTCCATGCGGATGGAAAGAAACACAGGGCAAAAGCTCGGGCATTCCATGCTGCAAATCAACAACCAGTTCAGACGGAAACATCTGCTCCAGATGCAAAGCTTCCAGTGGAGCATGCTTCTAATGATAAGGGTAGGGATGACAGTCCAGGTGAGTTGGGAAATGGGGAAGTAGTTCAGGCTGAAGGAGCAGAATCTGGGAAGAAAGAAAGAATAGTTAACGACAAGAATATAAAGTGGAAGAAGTTTATCAAATCAGTATTGAAATCTCAGCCTGATGGAAAATTGAAGATGAAGAAGTTGAGAAAACATGTTTTGGAAGCCTTGCAGGAATCTGGTGTTGAAGTGGATGAAACTGAACTTAGTGAGGCACTTGAGCATAAGATCAATTCAAGTTCCAAATTTGCAGTTGAGAAGAAGTATGTGCGTTTGGTGGCTAAGGATGGTAAAGAGGAGTTGTGA 903 0.4131 MLPELAETELQRHLATKKNKFRDGLVSFPKLPNHFRTCSASKLSCIDCGQIFGQDTVQQHTQCMTEMEKYGPKGQGKTLNVTTAKPNSNNKQKPEVDINVGLSERPPWFCRYVLLIALSNNIVVCNPLWVVTQGILCNTKATSKQTLLLHADGKKHRAKARAFHAANQQPVQTETSAPDAKLPVEHASNDKGRDDSPGELGNGEVVQAEGAESGKKERIVNDKNIKWKKFIKSVLKSQPDGKLKMKKLRKHVLEALQESGVEVDETELSEALEHKINSSSKFAVEKKYVRLVAKDGKEEL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0458 300 MobiDBLite consensus disorder prediction 160 214 - -
Lele17g0458 300 Gene3D - 25 63 - -
Lele17g0458 300 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 40 64 - -
Lele17g0458 300 Pfam LYAR-type C2HC zinc finger 43 70 IPR014898 -
Lele17g0458 300 SUPERFAMILY beta-beta-alpha zinc fingers 43 71 IPR036236 -
Lele17g0458 300 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 212 292 IPR039999 GO:0003677
Lele17g0458 300 MobiDBLite consensus disorder prediction 184 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0458 Lele-ChrLele17 16887726 16890547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0458 82 244 C2H2 Transcription Factor Family AT2G19380 31.288 7.63e-12 63.9