Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0452 ATGAAGTCATTTCTGTCATTGAATCATACTGATACTGACGTCAATTGTTCACACCTTGATTCTAATTACTCAATGGCTCGAGTTCCTTATCCATATGGTGATCCTTTTTATTGTGGCTCTGTATTATCATATGGATCACAGGCTATTAATCAACCCCAAATGGTTCCCCAAACGCTGGGACTTGCATCTACAAGAGTTGCATTGCCACTCGATCTTGCAGAAGACGGGCCCATTTACGTCAATGCAAAGCAATATCATGGAATACTGAGAAGGCGACAGTCGCGTGCAAAGCTTGAGGCTCAAAACAAACTTATCAAAAGCCGTAAGCCATATCTTCACGAGTCTCGTCATCGCCATGCTTTGAACAGGGTTAGGGGATCTGGAGGACGCTTTCTCAGCACCAGACAGCTTCAACAGTCCAATGCACAAGTTGTGACTAGTGACAATTCTGGTTCAGACTCTGTCAACAACTTGTATCAAAAGAAAGATACATCTTCAGAAGTGGAGATTCATCCCTCAAGGACGGGCAGTGGCAAAAATGCATCTTCTATCTCGACCTGCTCTGACATGACAAGTGGGTCCAGAAACAATGTTAATTTTAGGCAGCAGCCAGAGTGCAAGTTCTTGGGGAACTCTCCAAACATGGGCAGCACATCACAGTGCAGCGGTGGACTCACCTTTGGTGGTGGGACCCAGCAACGTGCACCAGTAGTCCGAGGTCAATACATGTGGAAGATGGTGAAAGATCAAAGCTTTGAGCCTTTCTTTGACCATGAAGGAAGTAGTCAAAACTGGGATATCTCAAAATGCTTTAGGAGCAAAGTCAAATATAATCTATACCTAGGGAAAATCACTTTTCCTAAGGTCCTGAGGAAAGAATGA 882 0.4422 MKSFLSLNHTDTDVNCSHLDSNYSMARVPYPYGDPFYCGSVLSYGSQAINQPQMVPQTLGLASTRVALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRHALNRVRGSGGRFLSTRQLQQSNAQVVTSDNSGSDSVNNLYQKKDTSSEVEIHPSRTGSGKNASSISTCSDMTSGSRNNVNFRQQPECKFLGNSPNMGSTSQCSGGLTFGGGTQQRAPVVRGQYMWKMVKDQSFEPFFDHEGSSQNWDISKCFRSKVKYNLYLGKITFPKVLRKE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0452 293 ProSiteProfiles NF-YA/HAP2 family profile. 74 134 IPR001289 GO:0003700|GO:0006355
Lele17g0452 293 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 12 198 IPR001289 GO:0003700|GO:0006355
Lele17g0452 293 MobiDBLite consensus disorder prediction 139 163 - -
Lele17g0452 293 ProSitePatterns NF-YA/HAP2 subunit signature. 79 99 IPR018362 GO:0003677|GO:0016602
Lele17g0452 293 MobiDBLite consensus disorder prediction 170 198 - -
Lele17g0452 293 PRINTS CCAAT-binding transcription factor subunit B signature 77 99 IPR001289 GO:0003700|GO:0006355
Lele17g0452 293 PRINTS CCAAT-binding transcription factor subunit B signature 108 131 IPR001289 GO:0003700|GO:0006355
Lele17g0452 293 Gene3D - 74 136 - -
Lele17g0452 293 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 77 131 IPR001289 GO:0003700|GO:0006355
Lele17g0452 293 MobiDBLite consensus disorder prediction 139 198 - -
Lele17g0452 293 SMART cbf3 73 134 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0452 Lele-ChrLele17 16822460 16824449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0452 19 140 CCAAT-HAP2 Transcription Factor Family AT1G17590 58.065 1.16e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lele17g0452 CBFB_NFYA 4.6e-27 No_clan