Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0447 ATGGATGGATCGGATACCGTTTCGGACGGCCTTTGTTCTCTGACGCTGATCTGGTGGTACTGTTCGCGTCAGCTGTTTGCTCCTGAGCTTCATCCATGTCGTCAGGTGAAGAAACACCGGCCGGGTTCTCAAGAACTTAGTGGAGTTTCAACGACTTCGAAGCAAGCAGAAGCAGTAATAAGTGCAATGTTTGGAGAGAAGATGACTAGTTTAGTTGCATATATGAATATTCTTCTTCTTTATTTTCTGTCCCTCTGTTTCTACCCTTCAGCTATTCTGTTCATTAAAGCATCAGAAATAAATGCAGAATCCTATGAACATGATAGGGTAATTAATCTTCCTGGCCAACCTTCAAGTCCATCAGTCTCACAATTTTCAGGTTACATCACTGTCAATAAAGATCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAATCATCTAAGAAGCCTCTCCTCCTCTGGCTCAATGGAGGTCCTGGATGCTCATCAATTGGTTATGGTGCGGCTGTTGAAATTGGACCTCTTACAGTCATAAAAAATGGTGAAGGGTTGCATTTCAACACCTATTCCTGGAATCAAGAGGCAAATTTGTTATTTGTGGAGTCCCCAGTTGGAGTTGGTTTTTCTTACACCAACACATCTTCTGACACCATAATAGATGATAGTTCTGTTGCTGAGGATTCCTACAATTTCTTGGTAAATTGGCTGCAAAGGTTCCCACAGTTTAAATCTAGAGATTTCTTTATATCAGGAGAGAGTTATGCTGGCCACTACATCCCCCAGCTGGCAGAGCTCATCTTTGATCGAAATAAAGATAGAAGCAAATACTCATTTATCAATCTTAAAGGATTTATTGTGGGGAATCCAGAAACTGAAGATTACTATGACTATACAGGCATCCTGCAATATGCATGGAGCCATGCAGTCATATCAGATCAGCAATATGTAAATGCAACACAAGTATGTGACTTTAAGAAATTTAATTGGTCTAAAGAATGCAATGAAGCCATGAATGTAGTCTTTGGTGAATACTCAGAGATAGACGTATACAACATTTATGCCCCAGCGTGCCGACTAAATAGCACCTCCTCTATAGCTTATGGTAGTAAAAGTAGAAGATCCAAATCACTCTCTAAGGGGATGATGAGAATCTTCGGCGGCTATGATCCATGTTATTCCACATATGTAGAAGAATATTTCAATAGGATAGATGTTCAGTCATCTTTTCATGTTGATATCAAAGGAAGAAACACTAGTTATACGTGGAAGACTTGCAGTGGGGACGCAGATGGTAGAATACCAGTGATAGGGACGAGATATTGGATTGAGGCTCTTGGATTGCCTCTCAAGTCTAGTTGGAGAACTTGGTACCATGATAATCAGCTTCAGATTCGTCAAAAAAACTTATCTTGGATTTGCCGAGAAACCAGTGAATCAATTCAGGCCAAAGCTCAGGATAAGGTCAAGATTCAGAATCGTAGTGACATTCATGATCTCGTGCTTCTTGTGGTCAACACTATAGTACTGCGAGTGGTATTAAATGCTCTGCTTGGAGCAACTTTGTCCAGTTTAGTTGCAGATATGAATATTATTCTGTGTTTTCTGTCCCTTTGTTTATACTCTTTAGCTATCCCATTCATTAAAGCATCAGAAATAAATGTAGAATCGTATGAACTTGATAGGGTAATTACTCTTCCTGGCCAACCTTCAAGCCCCTCAGTCTCACAATTTTCAGGTCATATCACTGTCAATGAAGCTCATGGGAGGGCCCTTTTCTATTGGTTCTTTGAAGCTCAATCTGAATCATCTACGAAGCCTCTTCTTCTCTGGCTCAATGGAGGACCTGGATGTTCTTCAATTGGGTATGGTGCAGTTGTTGAAATAGGACCTCTTACAGTCAACAAAAATGGTGAAGGACTGCATTTCAACCCTTATTCCTGGAATCAAGAGGCAAATTTGTTATTTGTGGAGTCACCAGTTGGAGTTGGTTTTTCTTACACAAACACATCTTCTGATCTCACCATATTAGAGGATAGCCTTGTGGCTGAAGATGCCTACAATTTCTTGGTAAATTGGCTGCAAAAGTTCCCACAGTTTAAATCTCAAGATTTCTTTATATCAGGAGAGAGTTATGCTGGCCACTATATCCCTCAGCTGGCAGAACTCATCTTTGATCGAAACAAAGATAGAAGCAAATATTCATTTATCAATCTTAAAGGTTTTATTGTGGGGAATCCAGAAACCGAAAATTATTTTGATTATAAAGGCCTTCTGGAATATGCATGGAGCCATGCAGTCATATCCGATCAGGAATATGACAAAGCAAAAAATGTTTGTGATTTCAAGCAATTTTATTGGTCTGAGGAATGCAATAAGGCCATGAATGTGGTCTTCCGAGATTACAGGGAGATAGATATTTACAACATTTATGCCCCATCATGTCGCCTAAATAATACTTCCTCCATAGCTCTAGATGACAATAATAGAGGCTCTGAATCAGTTCCTGAGGGGAAAAATGATTACAGACTGAGAAGGATGAGGCTTTTTGGAGGCTATGACCCATGTTATTCCACTTATGCAGAAGAATATTTCAATAGGATAGATGTTCAGTCATCTTTTCATGCTAATGTCAAAGAAGGAAACACAAGTATTGTAGCATGGAAGACTTGCAATGATTCCATATTAAATACATATAACTTCACCGTTTTCTCTGTCCTTCCCATCTACACAAAACTCATCAAGGGTGGTCTCAAGGTGTGGATTTACAGTGGGGACACAGATGGCAGAATACCAGTGATAGGGACAAGATATTGCATTGAGGCTCTTGGATTGCCCCTCAAATCTAGCTGGCGAACTTGGTACCATGATAGTCAGGTGGGAGGGAGGATAGTGGAGTATGAAGGGCTAACATATGTGACAGTGAGAGGAGCAGGTCATTTGGCGCCACTTAACAAGCCTAGTGAGGCTCTCTCCCTCATTCATTCTTTCCTCACTGGACAGAATCTCCCTTCTCATCCATGA 3033 0.4055 MDGSDTVSDGLCSLTLIWWYCSRQLFAPELHPCRQVKKHRPGSQELSGVSTTSKQAEAVISAMFGEKMTSLVAYMNILLLYFLSLCFYPSAILFIKASEINAESYEHDRVINLPGQPSSPSVSQFSGYITVNKDHGRALFYWFFEAQSESSKKPLLLWLNGGPGCSSIGYGAAVEIGPLTVIKNGEGLHFNTYSWNQEANLLFVESPVGVGFSYTNTSSDTIIDDSSVAEDSYNFLVNWLQRFPQFKSRDFFISGESYAGHYIPQLAELIFDRNKDRSKYSFINLKGFIVGNPETEDYYDYTGILQYAWSHAVISDQQYVNATQVCDFKKFNWSKECNEAMNVVFGEYSEIDVYNIYAPACRLNSTSSIAYGSKSRRSKSLSKGMMRIFGGYDPCYSTYVEEYFNRIDVQSSFHVDIKGRNTSYTWKTCSGDADGRIPVIGTRYWIEALGLPLKSSWRTWYHDNQLQIRQKNLSWICRETSESIQAKAQDKVKIQNRSDIHDLVLLVVNTIVLRVVLNALLGATLSSLVADMNIILCFLSLCLYSLAIPFIKASEINVESYELDRVITLPGQPSSPSVSQFSGHITVNEAHGRALFYWFFEAQSESSTKPLLLWLNGGPGCSSIGYGAVVEIGPLTVNKNGEGLHFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDSLVAEDAYNFLVNWLQKFPQFKSQDFFISGESYAGHYIPQLAELIFDRNKDRSKYSFINLKGFIVGNPETENYFDYKGLLEYAWSHAVISDQEYDKAKNVCDFKQFYWSEECNKAMNVVFRDYREIDIYNIYAPSCRLNNTSSIALDDNNRGSESVPEGKNDYRLRRMRLFGGYDPCYSTYAEEYFNRIDVQSSFHANVKEGNTSIVAWKTCNDSILNTYNFTVFSVLPIYTKLIKGGLKVWIYSGDTDGRIPVIGTRYCIEALGLPLKSSWRTWYHDSQVGGRIVEYEGLTYVTVRGAGHLAPLNKPSEALSLIHSFLTGQNLPSHP 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0447 1010 ProSitePatterns Serine carboxypeptidases, serine active site. 253 260 IPR018202 GO:0004185
Lele17g0447 1010 Gene3D - 909 1003 - -
Lele17g0447 1010 SUPERFAMILY alpha/beta-Hydrolases 107 465 IPR029058 -
Lele17g0447 1010 ProSitePatterns Serine carboxypeptidases, histidine active site. 973 990 IPR033124 GO:0004185
Lele17g0447 1010 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 567 990 IPR001563 GO:0004185|GO:0006508
Lele17g0447 1010 FunFam Carboxypeptidase 856 1006 - -
Lele17g0447 1010 FunFam Carboxypeptidase 909 1003 - -
Lele17g0447 1010 ProSitePatterns Serine carboxypeptidases, serine active site. 710 717 IPR018202 GO:0004185
Lele17g0447 1010 FunFam Carboxypeptidase 104 363 - -
Lele17g0447 1010 Pfam Serine carboxypeptidase 114 430 IPR001563 GO:0004185|GO:0006508
Lele17g0447 1010 Pfam Serine carboxypeptidase 570 1002 IPR001563 GO:0004185|GO:0006508
Lele17g0447 1010 Gene3D - 431 476 - -
Lele17g0447 1010 Gene3D alpha/beta hydrolase 102 371 IPR029058 -
Lele17g0447 1010 Gene3D - 395 430 - -
Lele17g0447 1010 Gene3D - 859 898 - -
Lele17g0447 1010 Gene3D alpha/beta hydrolase 560 820 IPR029058 -
Lele17g0447 1010 SUPERFAMILY alpha/beta-Hydrolases 566 1006 IPR029058 -
Lele17g0447 1010 PRINTS Carboxypeptidase C serine protease (S10) family signature 647 659 IPR001563 GO:0004185|GO:0006508
Lele17g0447 1010 PRINTS Carboxypeptidase C serine protease (S10) family signature 696 721 IPR001563 GO:0004185|GO:0006508
Lele17g0447 1010 PRINTS Carboxypeptidase C serine protease (S10) family signature 973 986 IPR001563 GO:0004185|GO:0006508
Lele17g0447 1010 PRINTS Carboxypeptidase C serine protease (S10) family signature 660 670 IPR001563 GO:0004185|GO:0006508
Lele17g0447 1010 FunFam Carboxypeptidase 560 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0447 Lele-ChrLele17 16768226 16783676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0447 887 1006 Calmodulin-binding Proteins AT2G22960 33.058 5.10e-15 72.8