Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0425 ATGCTTCAAACCTGGCTGGGTTCCGGAGCTGGGGTTAGGGTTAGGGTTTCTGAGAGATGTGGGATGCTTCAGGCATTGATGAATCTGCTCTCTCTCTGTTGGAAGCCATTCGGGCGTGGTTCTGATAATTGTGACACTATTGGAGCTGTTGGGAGCACTTTCAGGGGTGGGGCAGGCTGCAGAGCAGGTAAAGACGGCTTGCTCTGGTTCCGAGACGTAGGAAAGTATGGTTCCGGCGATTTCTCGATGGCCGTGGTTCAGGCGAACCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTGGGAACCTTTGTAGGTGTTTACGATGGTCACGGAGGACCCGATACATCTCGATATGTTTGCGATCACTTGTTTCGTAACTTTCAAGAAATAGCCGCTCAGTCACAGGGAGCTGTGACTGCTGAGACTATTCATAGAGCATTTCTTCAAACAGAAGAGGGGTTCACTTCTCTTGTGTCAGAATCATGGAGCACACGACCTCAGATTGCAACTACTGGGACGTGTTGTCTAGTTGGAGTGATATTTCAGCAGACCCTCTACGTGGCAAATGTTGGAGATTCCCGTGCTGTGTTGGGTAAGAAAGTTGGCAACACTGGAGGTATTGCTGCAATTCAGCTATCTACTGAACATAATGCAAATCTTGATGCAATCAGACAGGAACTTAAAGAATTACATCCGCATGATCCCCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTCAAAGGCATTATTCAGGTTTCTAGGTCTATAGGAGACGTATATATGAAACATGCGCAGTTCAACCGGGAACCAATTAATCAAAAATTCAGACTTCCAGAGCCAATGCACATGCCTATCTTGTCTGCTAGTCCAACAATTCTTACTCATCCTCTCCAACCCAGTGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAAAAAGCAGTGGATATTGTCCACAGCAATCCACGGCGGGGTAGTGCCAAGAGACTTATCAAGGCTGCCCTCCAAGAAGCAGCAAGGAAACGAGAAATGAGATACTCGGACCTCCGCAAAATTGACAAGAAGGTTCGACGCCATTTTCACGATGATATAACTGTGATTGTTTTATTCTTAAACCACGATCTTATATCCAGAGGCACAGTGATAGACCCTCCTCTTTCAATTCGAAGTGCCCTTGATCACTGA 1215 0.4658 MLQTWLGSGAGVRVRVSERCGMLQALMNLLSLCWKPFGRGSDNCDTIGAVGSTFRGGAGCRAGKDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDTSRYVCDHLFRNFQEIAAQSQGAVTAETIHRAFLQTEEGFTSLVSESWSTRPQIATTGTCCLVGVIFQQTLYVANVGDSRAVLGKKVGNTGGIAAIQLSTEHNANLDAIRQELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINQKFRLPEPMHMPILSASPTILTHPLQPSDSFLIFASDGLWEHLSNEKAVDIVHSNPRRGSAKRLIKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTVIDPPLSIRSALDH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0425 404 SUPERFAMILY PP2C-like 89 382 IPR036457 -
Lele17g0425 404 SMART PP2C_4 67 379 IPR001932 -
Lele17g0425 404 ProSitePatterns PPM-type phosphatase domain signature. 106 114 IPR000222 GO:0043169
Lele17g0425 404 PANTHER PROTEIN PHOSPHATASE 78 379 - -
Lele17g0425 404 FunFam Probable protein phosphatase 2C 42 71 389 - -
Lele17g0425 404 CDD PP2Cc 81 381 IPR001932 -
Lele17g0425 404 Gene3D - 72 389 IPR036457 -
Lele17g0425 404 Pfam Protein phosphatase 2C 104 350 IPR001932 -
Lele17g0425 404 ProSiteProfiles PPM-type phosphatase domain profile. 80 381 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0425 Lele-ChrLele17 16589682 16594586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0425 22 401 PP2C-type Phosphatase Gene Family AT4G38520 58.098 6.04e-159 451