Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0423 ATGGCTCCTTCGTCTTCTTCTTCCTTGTCCATAATAAAACCAGTTCTGTGTTTCATTGTGTTCTTGGCAACATGCCCTAGTTATGTTCTTGGTACCATCGAGCTTAAGGATTTAGTCATAGATTCTCCTCTATTAACCAAAAACATTCCTGCGAATCGAACGATTAAGGTCGACGATGATGGCAATGGCGATTTCAGATCCATTCAAGCCGCCATAGATTCTGTACCTGAAGGAAATTCTCAGTGGGTCATCATCCACATTAGGAAAGGAGAATACAGAGAGAAGGTGACGATACCAAAGAGCAAGCCGTATATATTCTTGAGGGGAAATGGGAGAGGGAGAACTGGTATAGTTTGGTCCCAGAGTTCTGTTGATAATATTGAGTCTGCAACTTTCAAAGTCGAAGCTCATAACGTCGTTGTCTTTGGACTCAGCATCAAGAACGAGGCACCTACCGGGGTAGCTTACACATCGCAGAATCAATCAGTGGCAGTATTTGTAGGAGCAGATAAGGTGGCATTCTATCACTGTGCATTCTATAGCACTCACAACACTCTCTTTGATTACAAAGGCAGACATTACTATGATGAATGCTACATTCAAGGCTCTATTGATTTCATCTTCGGCCGTGGCAAATCTCTCTTCCATAAATGTGAGATATTTGTGATAGGTGACAAGAGGACAGTGATACAAGGGTCAATCACAGCACAAAACAGAGAGTCAGCAACGGAGGAAAGTGGGTTTGTGTTTGTGAAGGGGAAGGTATATGGCATTGGAGGGGTGTACTTAGGAAGAGCCAAGGGTTCTCATTCCAGGGTCATCTTTGCCAAAGCCTATCTCTCTGCCACCATTGTTCCTTTGGGCTGGGCCAACTGGAGTTATGCCGGCTCCACCGAGAACTTATACCATGGGGAGTACAAGAACTTTGGACCTGGAGCTAATACAACAAAACGAGCCAGTTGGGCCAAACAGATTACTGACCAAGAATTCGACGCCTTCATGTCTGTCGATTTCATTGATGGCAAGGATTGGCTTCCTGCTTGGATATAA 1050 0.4438 MAPSSSSSLSIIKPVLCFIVFLATCPSYVLGTIELKDLVIDSPLLTKNIPANRTIKVDDDGNGDFRSIQAAIDSVPEGNSQWVIIHIRKGEYREKVTIPKSKPYIFLRGNGRGRTGIVWSQSSVDNIESATFKVEAHNVVVFGLSIKNEAPTGVAYTSQNQSVAVFVGADKVAFYHCAFYSTHNTLFDYKGRHYYDECYIQGSIDFIFGRGKSLFHKCEIFVIGDKRTVIQGSITAQNRESATEESGFVFVKGKVYGIGGVYLGRAKGSHSRVIFAKAYLSATIVPLGWANWSYAGSTENLYHGEYKNFGPGANTTKRASWAKQITDQEFDAFMSVDFIDGKDWLPAWI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0423 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 47 345 - -
Lele17g0423 349 FunFam Pectinesterase 49 349 - -
Lele17g0423 349 Gene3D - 49 348 IPR012334 -
Lele17g0423 349 Pfam Pectinesterase 55 341 IPR000070 GO:0030599|GO:0042545
Lele17g0423 349 ProSitePatterns Pectinesterase signature 2. 200 209 IPR033131 -
Lele17g0423 349 SUPERFAMILY Pectin lyase-like 50 347 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0423 Lele-ChrLele17 16577924 16580819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0423 43 345 Carbohydrate Esterase AT5G07430 39.216 1.50e-69 220