Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0421 ATGGACAAATTTATTCACTTACAAGGTGACTACAACGCCATCGTGCATAACCCGAGTCCATCTGTCCCTCCCATTTTCACTTCGGATGGTAACACGTGCTGTTCAGAGTGGAACACTGCCATGGAAAAGCTTACTGGTTGGTTTTGTGGAGATGTCATTGGGAAATTGTTGGTGGGAGAGGTTTTTGGTAATTTCTGTCAACTGAAGGGTTTGAATGATCAAGCCAAGTTCTTGATGGTCTTGCAAAATGTACAGGATGGTCAGATTATTGGGGCTTTATGCTTCTTGCAAACTGCAAGTTCTGAACTTCAACAGGCTCTGGATGTAAACAGGAAAATGAAGAAGAATTGCCTTGCTGCGATGAAGGAATTAGCTTACATTCGTCGAGAAATAAAAAGTCCTCTGAGTGGAATACGCTTTGCTAACTTACTTTTGAAGGGTACTGAATTGAGTGATGATCAAAATCAATTTCTTGAGGCTGGTAATGCTTGTGAGAAGCAGATGGTCAGGATAATGCATGATGTGGACTTGGAGAGCATTGGGGACAGGGGAGATTCTAAGCAACTATTTCTGATTGTTGGTTTATTCTCTGCAAGACAATTAGAGCCATAA 612 0.4167 MDKFIHLQGDYNAIVHNPSPSVPPIFTSDGNTCCSEWNTAMEKLTGWFCGDVIGKLLVGEVFGNFCQLKGLNDQAKFLMVLQNVQDGQIIGALCFLQTASSELQQALDVNRKMKKNCLAAMKELAYIRREIKSPLSGIRFANLLLKGTELSDDQNQFLEAGNACEKQMVRIMHDVDLESIGDRGDSKQLFLIVGLFSARQLEP 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0421 203 Pfam PAS fold 10 64 IPR013767 GO:0006355
Lele17g0421 203 CDD HisKA 124 175 IPR003661 GO:0000155|GO:0007165
Lele17g0421 203 ProSiteProfiles PAS repeat profile. 10 62 IPR000014 -
Lele17g0421 203 Coils Coil 96 116 - -
Lele17g0421 203 Gene3D - 93 180 - -
Lele17g0421 203 SMART HisKA_10 120 184 IPR003661 GO:0000155|GO:0007165
Lele17g0421 203 SUPERFAMILY PYP-like sensor domain (PAS domain) 24 65 IPR035965 -
Lele17g0421 203 Pfam His Kinase A (phospho-acceptor) domain 124 181 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0421 Lele-ChrLele17 16566221 16566927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0421 1 182 Histidine Kinase Gene Family AT2G18790 52.336 1.19e-66 219