Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0362 ATGGACACACCAGAGAGGAACCAGATCGGCACTCCAATCTCCAAATTTGAGGATTCACCCGTCTTCAACTTTATCAACAGTCTTTCTCCTATAAAGCCTGTTAAGTCGATTCATAGTATTCAGACTATCAATTCACTCACTTTTTCATCTCCTCCATCTGTGTTTACATCACCCCATGTCACCTGTCACAGGGAATCTAGATTTCTCAGGAGGCATAACGTTTTAGATGCATCAAAGCATAAGGTTTTGTCTGAAGATGGGAAAAAAATATGTTCAAGTGAAGAAGCTCTTGCAGATTCAACTCACGCATATCACAACTCAAGTGAGCTACAAGGAAATGCTAATCAAGGGATTCCCCTGCAAGATTCAACAATTGTGCCATCTAATGAGCACTCAGACTTTCCAATTGAGCTACCGCAAACCTTAAAATATGATTGTGGTAGCCCGGCTTGTGATCCTCCACCCGGTGGTGACGAGACAAATTCTCTTCTGGATTTGTCGAGTAAGGCAGAATCAGATGTTGCCTGTGTTGATGAAGTCTGTAAAAAAAATTCATCTGAGACGGAAGTGTTGCTTCCAGGAATATGTCAAATTGAGCCAATAATTGGAGCCTCAGAATGTGACTGGGATGGTTTACTTTCAGATTCTACTGATCTATTAATTTTCAACTCTCCAAATGAAAGAGAAACTTTAAAGGGTCTAATGCAGAAATCATTTGACCCCACAGGACGGTTTAGCAATTTTATGTCTCAGTTGCCACAAACTACCTTAATTGATAGTGAGAAAATGCGAATTGTTGATCCAGCTGCTTCTGGTTCTGTACATGAGATGGAAGGTCATCCTTCACAACCAGGAGAAGACATTGACAATGATCAGGCACAGGACAATCTTGCTAACACTGCTGGGATGGGTGGCAACACTAATAATGCAATGGATAATCCGCTTGTTTCTATAACACGCCATGGCATACGGAGGCGTTGTCTAGACTTTGAGACGGTTGGAGGAAGAAGAAAGAACTCCAACGATGGTTCAAATAACAGTAGTTCCGGCACATTACAGTCTGATGAGAGGAATGTTGCTAATGATAAGCAACTGCTTCCTGCAAAACGCAATGGTAATTCACAGAGGTGCATTTTGCCTGGAATTGGCTTACACTTGAATGCTCTTGCGACCATAAAAGATTACAAAAGCTCAAGAGTTGAAAATATATCTTCTGGAAGACAACTCAGTCTGCCTAGCCCTGCCTTGCAACAATCTTCAAGCCAAGAACATAGTCTAGCATTGGTGCCTGTATCAGAAGAAGGAGATTCGGATCTGCCAGACAATGGGGTTCAGCCTGCTGAAGATTGTTCCCAGCCCTCAGGATATATGATTGATGAAGATTTCAACCAGAACAGCCCCAAAAAGAAAAGACGTAAGTTGGAGCCAGCTGGAGATGGTGAGTCTTGTAAGCGTTGTAATTGCAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCCGGTGTCTACTGCATAGAACCTTGTTCTTGCCAGGATTGCTTCAACAAGCCTATTCATGAGGATACTGTTCTTGCAACTCGCAAGCAGATTGAGTCTCGTAATCCTCTAGCCTTCGCTCCCAAAGTCATTCGAAGCACTGATTCTGTACCTGAAATTGGGGATGATGCCAACAAAACTCCAGCTTCGGCACGGCACAAAAGAGGATGTAACTGCAAGAAATCCAGCTGCTTAAAGAAATATTGCGAATGCTATCAGGGCGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAATGCGTTTGGTAGAAAGGATGGTTCCGTTCCTATTGGAATAGAAGCTGAACCAGAAGAAGAAACAGAATCATCTGAGAAGACTGTGGCCGAAAAACCCTTACAAAAGTATGAGATCCAGAACAACGAAGAACATCCAGAGTCTACTCTTCCGACGACACCGTTACGTATTTGCAGACCATTGCTTCCTCTATCATTTTCATCAAAGGGAAAACCACCAAGATCTTCTTTCATTACTACTATACCGGCTTCTGGATTGTACGCCAGCCAGAAACTTGGGAAACCCAGCATCCTTCGGTCTCAACCTAAGTTTGAAAAGCAGTTTAAACCCGTTTCCAACGACGAAATGCCGGAGGTTCTCCGGGGAGACGGATCTCCTAGCGTTAAGACATCATCTCCCAACGGCAAGAGGATCTCCTCTCCTAACTGCGACTTTGGATCATCGCCGAGTCGCAGAAGTGGCAGGAAGTTGATATTACAATCTATCCCCTCATTTCCTTCTCTCACTGCTCCTCACCTTTAG 2331 0.4354 MDTPERNQIGTPISKFEDSPVFNFINSLSPIKPVKSIHSIQTINSLTFSSPPSVFTSPHVTCHRESRFLRRHNVLDASKHKVLSEDGKKICSSEEALADSTHAYHNSSELQGNANQGIPLQDSTIVPSNEHSDFPIELPQTLKYDCGSPACDPPPGGDETNSLLDLSSKAESDVACVDEVCKKNSSETEVLLPGICQIEPIIGASECDWDGLLSDSTDLLIFNSPNERETLKGLMQKSFDPTGRFSNFMSQLPQTTLIDSEKMRIVDPAASGSVHEMEGHPSQPGEDIDNDQAQDNLANTAGMGGNTNNAMDNPLVSITRHGIRRRCLDFETVGGRRKNSNDGSNNSSSGTLQSDERNVANDKQLLPAKRNGNSQRCILPGIGLHLNALATIKDYKSSRVENISSGRQLSLPSPALQQSSSQEHSLALVPVSEEGDSDLPDNGVQPAEDCSQPSGYMIDEDFNQNSPKKKRRKLEPAGDGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSTDSVPEIGDDANKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSVPIGIEAEPEEETESSEKTVAEKPLQKYEIQNNEEHPESTLPTTPLRICRPLLPLSFSSKGKPPRSSFITTIPASGLYASQKLGKPSILRSQPKFEKQFKPVSNDEMPEVLRGDGSPSVKTSSPNGKRISSPNCDFGSSPSRRSGRKLILQSIPSFPSLTAPHL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0362 776 MobiDBLite consensus disorder prediction 287 314 - -
Lele17g0362 776 MobiDBLite consensus disorder prediction 334 358 - -
Lele17g0362 776 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 484 519 IPR005172 -
Lele17g0362 776 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 570 605 IPR005172 -
Lele17g0362 776 MobiDBLite consensus disorder prediction 702 776 - -
Lele17g0362 776 ProSiteProfiles CRC domain profile. 482 607 IPR005172 -
Lele17g0362 776 MobiDBLite consensus disorder prediction 271 314 - -
Lele17g0362 776 MobiDBLite consensus disorder prediction 728 770 - -
Lele17g0362 776 MobiDBLite consensus disorder prediction 463 479 - -
Lele17g0362 776 SMART CXC_2 481 522 IPR033467 -
Lele17g0362 776 SMART CXC_2 567 608 IPR033467 -
Lele17g0362 776 MobiDBLite consensus disorder prediction 613 657 - -
Lele17g0362 776 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 772 IPR044522 GO:0003700
Lele17g0362 776 MobiDBLite consensus disorder prediction 626 646 - -
Lele17g0362 776 MobiDBLite consensus disorder prediction 433 479 - -
Lele17g0362 776 MobiDBLite consensus disorder prediction 337 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0362 Lele-ChrLele17 16094898 16099792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0362 16 775 CPP Transcription Factor Family AT4G14770 44.103 1.11e-166 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele17g0362 TCR 1.9e-11 No_clan