Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0360 ATGGCTGGTCTTGACGTAAATCACAAGTCTAAGTTTAATTTCATCATCACTTCGTCTCTTAGGGTTTCTGTGCTCTTCGTATTACGGCCGCTCGCAGAATTCCCGCTTCCCGCTCCACCTCCAGCCATGGCCGTAGGCAAGAACAAGCGCATCTCGAAGGGGAAGAAAGGAGGAAAGAAGAAGGCAGCTGATCCATTTGCCAAGAAGGATTGGTATGATATAAAGGCTCCTTCTGTTTTCCAAGTTAAGAGTGTGGGCAAAACTCTCGTCACGCGTACTCAGGGTACCAAGATTGCCTCAGAAGGGCTGAAGCACAGAGTGTTTGAGGTCTCATTGGCTGATCTTCAAAATGATGAGGACCACGCATACAGGAAGATTAGGTTGAGAGCTGAAGATGTTCAAGGGAAGAATGTTCTCACAAATTTCTGGGGAATGGACTTCACAACTGATAAGTTGAGGTCATTGGTTCGCAAATGGCAAACTTTGATTGAAGCTCATGTGGACGTGAAGACCACCGACAACTACACATTGAGGATGTTCTGCATTGGGTTCACTAAGAGACGTGCGAACCAGGTTAAGAGGACCTGCTATGCCCAATCAAGCCAGATCAGACAGATCCGCAGGAAGATGAGGGAGATCATGACTAACCAGGCAACTTCCTGTGATTTGAAAGAGTTGGTTCGCAAGTTCATCCCCGAGATGATTGGAAAGGAGATTGAGAAGGCAACATCTAGCATCTATCCTTTGCAAAACGTGTTCATTCGCAAGGTCAAGATCTTGAAGGCTCCTAAGTTCGATCTTGGAAAACTCATGGAGGTTCATGGAGATTATTCAGAAGATGTTGGTGTGAAGGTAGACAGACCTGCAGATGAGACAATGGCTGAGGCACCCACCGAAATTGTTGGAGCTTAA 912 0.4638 MAGLDVNHKSKFNFIITSSLRVSVLFVLRPLAEFPLPAPPPAMAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKSVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMAEAPTEIVGA 303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0360 303 Pfam Ribosomal S3Ae family 58 263 IPR001593 GO:0003735|GO:0005840|GO:0006412
Lele17g0360 303 SMART Ribosomal_S3Ae_2 57 263 IPR001593 GO:0003735|GO:0005840|GO:0006412
Lele17g0360 303 ProSitePatterns Ribosomal protein S3Ae signature. 103 115 IPR018281 GO:0003735|GO:0005840|GO:0006412
Lele17g0360 303 Hamap 40S ribosomal protein S1 [RPS3A]. 43 300 IPR027500 GO:0003735|GO:0005840|GO:0006412
Lele17g0360 303 PANTHER 40S RIBOSOMAL PROTEIN S3A 42 295 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele17g0360 Lele-ChrLele17 16082829 16088465 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0360 43 303 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 87.786 1.52e-166 461