Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0358 ATGTCTTCTCAATTTAATCATAATACTTGTCTGTTGTTTCTCATTATTCTCCTCTCAATTCTTAACCCTTCCCATCAATCTCTTCTCAATATCAAGAACCCTAAACTCAAAAAAGCTTACACAGCTCTTCAAGCATGGAAGCACGCTATCACTTCTGATCCCCTAGGTTTTACCTCGAACTGGAACAATCTCGAAGTCTGCAACTACACCGGAATCTACTGTGCTCATTTGCCGGAGTATCCTCACTCGGTCACCGTCGCCGGAGTGGACCTCAACAGTGCTAACATATCCGGTGCATTACCGGAAGAGATCGGCCTTTTAATGGACCTCGCTATCTTCCACATCAACTCAAACCGCTTCATTGGAACCCTCCCTAAAAGCTTTAGCTCCATGAACCGTCTCTTCGAGCTCGACGTTAATAACAATAAACTCTCTGGTTCTTTTCCTAATGTCATTTTGAATCTCCCTTCATTGCGTTACTTAAATATAAGGTTCAATGATTTCCAAGGCAATGTTCCTTCTAGCTTATTCGACATGAAACTCGACGCCATTTTGATAAACGACAATAAGTTTCAGTTCACATTGCCTGAGAACCTCGGAAGTTCTCCTGCTTCTGTGATTGTAATGGCGAATAATGATCTTAAAGGTTCTATTATTCCTCCTAGTGTGGCCAAAATGAAGAATACACTGAATGAGATTGTAGTTTCAAACACTGGATTAAGTGGTCGTTTGCCTAAAGAAATTGGGGATTTAGTTAACTTGACGGTTATGGATTTGAGCTCTAACAATTTTGTTGGGTCGTTGCCGGAGTCCATGGCGGGGATGAAGAGCTTGGAGGTGTTGAATGTGGAGCATAACAAATTTTCCGTTAATCCCAATGAAGAAGAGGACGTCGATGATGGGAGTGCAGTGGCCGTTGGTGAATGGAATAGAGTAAGAAGAAGAGGGAGCGTGCGATTTCTTAGAAATCTTTTAAACGGCACCGCCGGGGGAAACGTTGCGGAGGGTGCCGCCGTGGGTCCAATAGCGCCTGTAAGACTTGCACAAGTAACTGTAGCAGAACTTGGTAGCTTTGGAATGGTAACAAGGACATGGCAACGGTTCAGTCCGCTGTCGGGGAGGGAACCCCGAGCCGTTTTGAGGCCTGTAAGCACCACTCAATGCATAATAGCCTCCATCTCCAATCTCAGAAAAATACCAATGGCGACTGCCCCAGCTTCAGCGGAAGGAGAAAAAATGTCTCTGAAAGATCAGGGCAATGAGTTTTTCAAGTCAGGAAAGTATCTCAAAGCTGCAGCACTTTACACTCAAGCTATCAAGCAAGATCCTTCAAACCCTACTCTTTATAGTAACCGTGCTGCTGCATTGCTGCAACTGGATAAGCTTGCAAAAGCTCTTGAGGATGCTGAGATGACAATAAAACTAAAACCTGAATGGGAAAAGGGGCATTTTAGGAAAGGATGCGTACTTGAGGCCATGAAACGATATGATGATGCCTTGGCTGCCTTTCAGATGGCTTTGCATTATAACCCACAAAGTCAGGAAGTATCAAAAAAGATAAGGAAGATAAACCAACTAGCAAAAGATAGAGATCGAGCACAAGAAGTGGAGAATAAAAGATCTAATGTTGACATGACGAAACATTTAAATACATTGAAACCTGAATTGTCTGGAAATTATGGATCTGAAGAATGCTGGAAAGACTTGTTTACTTTCCTTGTTGAGACCATGGAGACAGCTGTAAAATCATGGCATGGATCTTCCACAGTGGATCCTAGAGTCTACTTCCTTCTTGATAAAGAAAAGACACAGACTGATAAATATGCCCCAGTTGTTAATATTGATAAGGCCTTTGAATCACCACATACACATGGAAGCTGTTTTTCATTTCTCAGGCAATATGCTGAGGACTCCTTTGCCATGGCAGCTTGCTTAGTGGTTCCCAAAAGCATAATTGCTTATCCGCAGGTCTGGAAAGGCCAAGGATCAAGGAGATGGAAACATGGGCAGAATGATGGTTTCTTTGTACAATTTGAATCACCTTCACTAAGAAAGCTGTGGTTTATTCCCAGTTCCAATGAAGTGGGGCAAACATTATGCAGGGACCCAGAAGCCTTGGACATTGGTGCTCATGAAATTCTTCCGCGTATATTCAAAGAAAAGCTGCCTAGTTCTTAG 2178 0.4298 MSSQFNHNTCLLFLIILLSILNPSHQSLLNIKNPKLKKAYTALQAWKHAITSDPLGFTSNWNNLEVCNYTGIYCAHLPEYPHSVTVAGVDLNSANISGALPEEIGLLMDLAIFHINSNRFIGTLPKSFSSMNRLFELDVNNNKLSGSFPNVILNLPSLRYLNIRFNDFQGNVPSSLFDMKLDAILINDNKFQFTLPENLGSSPASVIVMANNDLKGSIIPPSVAKMKNTLNEIVVSNTGLSGRLPKEIGDLVNLTVMDLSSNNFVGSLPESMAGMKSLEVLNVEHNKFSVNPNEEEDVDDGSAVAVGEWNRVRRRGSVRFLRNLLNGTAGGNVAEGAAVGPIAPVRLAQVTVAELGSFGMVTRTWQRFSPLSGREPRAVLRPVSTTQCIIASISNLRKIPMATAPASAEGEKMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLAKALEDAEMTIKLKPEWEKGHFRKGCVLEAMKRYDDALAAFQMALHYNPQSQEVSKKIRKINQLAKDRDRAQEVENKRSNVDMTKHLNTLKPELSGNYGSEECWKDLFTFLVETMETAVKSWHGSSTVDPRVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHGSCFSFLRQYAEDSFAMAACLVVPKSIIAYPQVWKGQGSRRWKHGQNDGFFVQFESPSLRKLWFIPSSNEVGQTLCRDPEALDIGAHEILPRIFKEKLPSS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0358 725 Gene3D Tetratricopeptide repeat domain 411 525 IPR011990 GO:0005515
Lele17g0358 725 ProSiteProfiles TPR repeat profile. 480 513 IPR019734 GO:0005515
Lele17g0358 725 Coils Coil 452 472 - -
Lele17g0358 725 Gene3D Ribonuclease Inhibitor 207 303 IPR032675 -
Lele17g0358 725 Gene3D Ribonuclease Inhibitor 37 206 IPR032675 -
Lele17g0358 725 SMART tpr_5 412 445 IPR019734 GO:0005515
Lele17g0358 725 SMART tpr_5 480 513 IPR019734 GO:0005515
Lele17g0358 725 SMART tpr_5 446 479 IPR019734 GO:0005515
Lele17g0358 725 FunFam serine/threonine-protein phosphatase 5 411 525 - -
Lele17g0358 725 Pfam TPR repeat 419 459 - -
Lele17g0358 725 Pfam Leucine rich repeat N-terminal domain 39 74 IPR013210 -
Lele17g0358 725 SUPERFAMILY TPR-like 414 523 IPR011990 GO:0005515
Lele17g0358 725 Pfam Leucine rich repeat 110 168 IPR001611 GO:0005515
Lele17g0358 725 Pfam Leucine rich repeat 230 288 IPR001611 GO:0005515
Lele17g0358 725 ProSiteProfiles TPR repeat profile. 412 445 IPR019734 GO:0005515
Lele17g0358 725 SUPERFAMILY L domain-like 40 291 - -
Lele17g0358 725 FunFam Leucine-rich repeat extensin-like protein 1 40 201 - -
Lele17g0358 725 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0358 Lele-ChrLele17 16054715 16064745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0358 21 289 Leucine-rich Repeat extension Gene Families AT3G22800 63.100 3.92e-113 348