Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0348 ATGAACGCCGGCTCCGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACGGAGGATGACATTTCCCAGCTCACCCGCGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGTGATGGGTTGTGGAATAAAGTATGCTAAAAATTCATGGTCGATACAACGTGTCCGTACAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCGGCTGAGGACGATTCCGGCGCCGGACCCATACGGAGATTCCCTTTTGTTTCCGCTCAAGAAAATACCCCACCCGATAATCCAGATGTGACTGGTAGTGACAGTGGCGGCGGCGTCGCCGGAGTTGAGGCGACATCGACTGGGCCGACTGAAGAGCCGGCTTTCCATGCTGCCGAAGAGCTTAACAAATCTGTGTCATCTGGAGAGAAACCAACCAACATTGAAACGAATGAGAAGGTCGTCTGTCCCAGAGGGTGTGCAACTAGTGGGCCTGTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTGTATGATGGGGTGCCACCTGAAAAGGCACGGACAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTAAAGACGAACCATTCAAAAGAAGTACATCAGTCTGGCCTTGTCATTTACAGACGGATAAAGATACCCTTGTCCCAATTGATGGCACAGTCTCTCAGTTTGCTCAAGCAGATAAGATGGTGGAGTATCCTTTGCATTACAGGGAGAAAGGGAGCACAGCTCGTGATTCTGGAGGTTCTAGATATGTGGATGGTCAGGCGAGCAGGAAAGTGTCATTGCAGCGATATTTAGAAAAGCGAAAGGATAGGGGAAGATTAAAGAGCAAGAAATTTACGGGAGTAACTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATGCCTCAAATGGGAATTCAAGCCGTAGTAGCACAAGCTCTCCGCCACAGCCAAGGCCGCCTCAAGCTTCCAGTGGCTCAGCTGACAACAAGACAAAGATTGGCCTTCCTGTTGATCTCAATCACAAAGATTTTCAAGAATGCTAA 1101 0.4877 MNAGSATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKVMGCGIKYAKNSWSIQRVRTGMRRPSWNKSQAIQQVISLKALLDPAEDDSGAGPIRRFPFVSAQENTPPDNPDVTGSDSGGGVAGVEATSTGPTEEPAFHAAEELNKSVSSGEKPTNIETNEKVVCPRGCATSGPVGQMTIFYCGKVNVYDGVPPEKARTIMQLAASPIYIPKDEPFKRSTSVWPCHLQTDKDTLVPIDGTVSQFAQADKMVEYPLHYREKGSTARDSGGSRYVDGQASRKVSLQRYLEKRKDRGRLKSKKFTGVTSNMEMYFSHQVKAHASNGNSSRSSTSSPPQPRPPQASSGSADNKTKIGLPVDLNHKDFQEC 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0348 366 MobiDBLite consensus disorder prediction 317 366 - -
Lele17g0348 366 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 333 IPR040390 -
Lele17g0348 366 MobiDBLite consensus disorder prediction 258 279 - -
Lele17g0348 366 Pfam tify domain 177 205 IPR010399 -
Lele17g0348 366 MobiDBLite consensus disorder prediction 100 135 - -
Lele17g0348 366 MobiDBLite consensus disorder prediction 317 331 - -
Lele17g0348 366 Pfam Jas motif 276 293 IPR018467 -
Lele17g0348 366 ProSiteProfiles Tify domain profile. 171 206 IPR010399 -
Lele17g0348 366 SMART tify_2 171 206 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0348 Lele-ChrLele17 15962221 15966970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0348 1 321 Tify Gene Family AT4G14720 46.201 3.06e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele17g0348 tify 4.7e-16 No_clan