Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0336 ATGAAGCTTCTTCAGTCCGAGGAAACCGCCTCTGAGGCTTGCGACTTTCCTGAGGAAACCCAAGTAGAGAAACCCCCAAGGGCTGATGGCAATGACCGTGGCCTTGATAATGGGGATTCGGTTCTCGATGTCTTCGGGAAAACCGTGGAGTTCCCGGTATTGGAGAACGCGGAAGACTCCTTGGAGGGCTTGTATTTTTATAAGAATGTTTACAATTTGATCCCCAAGTCTCTGGGAGGTCTTGCACGGTTGAAGACATTGAAGTTCTTCGGGAATGAGATTAATTTGTTTGCCCCGGAGTCTGGAAACTTGACGGGCTTAGAGTGCTTGCAAATGAAGATATCTTCTCCTGGGATTGGTGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAGGAGTTAGAGTTGTCCAAAGTGCCTCCACGGCCTTCTGCTTTCCCTATATTGACCGAGATTTCTGGTCTTAAGTCCTTGACCAAGCTATCTGTTTGCCACTTTTCGATAAGATACCTTCCTCCTGAAATTGGCCTCTTAAAGGAACTGGAGTATCTTGATCTTTCATTCAATAAGATGAAGACATTGCCTTCCGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTACCATCAACTATGGCCTTGTTGTCTGGGTTGGAGAACTTGGACCTGTCAAATAATAGGTTGACTTCATTGGGGCCTCTTGAACTTGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGTTCAATAAGCTGCGCAACACGCTTCAAATACCTTCATGGATTTGCTGTAATATGGAAGGAAATGACAAAGGTGAATGCAGTGATGATGTTAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAACTAGTTCACTGGAGAATGATGGACTACTTTCACATGCATCTCGTAATAGCTCATCAAACCTATTAACTAGCTCCTTGTCTAGCAGCAGATGTTTTGCAACCCGGAAATCAGGTAAAAGGTGGAAGCGGCGGCACTACCTACAGCAGAAAGCCCGTCAAGAGTGCTTAAACAACAGCAGGAAGTGGAAAGGTTTAAATAATTCCCAACTGAGCAAGGATATGCATAGAATTTGTGAATCAGAAAACCAGGGCGATCTTGCTCTTGAAAACTGCAGTGAAGCTCATACATCAGACCTTGTGGGTCTGGATGATGAAGCTAAAAAGATGGTCTCAGAAGAAGCTGGGAATGACAGTGTAATTGATGATGTTAACAATAATGAAGTGGATATTGAAAAGCAGTTTTCTAAGGATTGCTGTTCTAGTGAAAGTGAAGATGAAAAAGATGTTAATAATAAAGATGCTTCCTTATGCCCCTTGGAGAATGGACCTAGTGGGCAGGACAATGCATCAAGTTCAGAATCTTTGAAGCATATTTCTAAATCTAAGAGACATTCAGAAAGGTATCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGACAGCTCATCATTGTCCTACAAGTACAGTAGATTATCATTTTGTGGCACTGAAGACCATCTGCCAGATGGCTTTTATGATGCTGGACGTGATCGACCTTTTATGACCCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCCTCTCGTGAAATCATCTTGCTGGACAGAGAAAGGGATGAAGAACTGGATGCCATTACACTCTCTGCTCAGTCATTGGTGTTTCATTTGAAGCAGTTAAACGATTTTACGAAACATGGGAATCAAGCTGCTCTTGATAACTTCCAGGTTGCTTCACTTATTGCACTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAGGTAATATTGTAGAAAGGACACGAAAATCAGTGTCCGGTTCAAACTATCATAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAACAGTGATATTAGTGCTGCCTCTAAACCAGTTGTGAACAGTTTAGAAGACATTACTCTAGCTAATATCTGTGAAAAAACTCTCGCTTCTATAAAAAGAAGACGAAGCTCAATCATAGTTCCCATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTCTGCTTTTTAAGTATTTATGTGATCGCATGGAGCCTCCACTACCTTGTGAGCTTGTTAGGGGTTTCTTGGATTATTCACCACATGCCTGGAACACCATCGTAGTTAACAGAGGTGATAGTCAGGTTAGAATGTTAGTTGATGCATGCCGGCCGCATGATATAAGAGGAGAGGAAGACCCTGAGTTCTTTTGCAGGTATATACCTCTTAGTCGAACCAAAGTTCCTATTTCCCCTGATGGAACTCCTGGTCCTAGTTGTTCATTTCCATCTCTGTCTACATGTGACAAATTTGAGAAGGCATCTTCAAGTACTATAGTTCGGTGCAAATTTGGGTCAATTGAGGCTGCAGCAAAGGTGCGTACCTTGGACTTGAAGGAGAGTTCACCAGACAAAATAAAAAACTTCGAATATAATTGTTTGGGAGAAGTGAGAATTTTAGGTTCTCTGAAACATCCCTCTATAGTTGAAATTTATGGACATCAAATATCTTACAAGTGGACTCTTTCAGAGGATGGTAATCCTGAGCATTGTGTATTAAGGTCTGCTATTTTTATGGAGCACATAGAAGGGGGCTCTTTGAGAACCTATCTTGATAAGTTATCAAAAGCTGGTGAAAAGCATGTTCCCATGGAGCTGGCTTTTTATATTGCCAAAGATGTTGCGTGTGCGTTGTCAGAGCTGCACTCGAAGCACATAATTCATCGTGATGTAAAAAGTGAAAACATTCTGATTGATTTGGATAGAAAGAAAGATGATGGCACCCCTACTGTGAAGCTTTGTGATTTTGATAGTGCAGTGCCACTAAGATCACCTTTGCATAGCTGCTGTATTGCTCATGTGGGAACACCTCCTCCTTATGTTTGCACTGGAACACCACGATGGATGGCTCCGGAGGTTATGCGGACCATGTATAAAGAAAATACTTATGGATTGGAAGTTGATATCTGGTCATTTGGATGCTTACTTGTGGAGCTTCTCACACTGAGTATTCCATATTCTGGGCTATCTGATTTACAATTCCATGACATTTTACAGATGGGTAAACCACCACAGTTAACCGAAGAACTGGAGGCCCTGAGTTCACCGAACGAGCCCACAATGATTCGATCCAGTGATGAGCCAGAAAAACCAGATGCTGAGGTAGACACGATGAAATTCCTTGTTGATTTGTTTCATAGGTGTGTCGAAGAAAATCCAGCCAAACGGCCTACAGCGAAAGAAATCTATGACATGCTGCTTGATCAAACAGGCCGTCTAAAAGTACAAGATGTTGGGAAGAGTTAG 3366 0.4183 MKLLQSEETASEACDFPEETQVEKPPRADGNDRGLDNGDSVLDVFGKTVEFPVLENAEDSLEGLYFYKNVYNLIPKSLGGLARLKTLKFFGNEINLFAPESGNLTGLECLQMKISSPGIGGLPLHKLKGLKELELSKVPPRPSAFPILTEISGLKSLTKLSVCHFSIRYLPPEIGLLKELEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMALLSGLENLDLSNNRLTSLGPLELGSMHKLQNLNLQFNKLRNTLQIPSWICCNMEGNDKGECSDDVSSSSVEMDVYETSSLENDGLLSHASRNSSSNLLTSSLSSSRCFATRKSGKRWKRRHYLQQKARQECLNNSRKWKGLNNSQLSKDMHRICESENQGDLALENCSEAHTSDLVGLDDEAKKMVSEEAGNDSVIDDVNNNEVDIEKQFSKDCCSSESEDEKDVNNKDASLCPLENGPSGQDNASSSESLKHISKSKRHSERYLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGTEDHLPDGFYDAGRDRPFMTLESYEQNQCLASREIILLDRERDEELDAITLSAQSLVFHLKQLNDFTKHGNQAALDNFQVASLIALFVSDHFGGSDRGNIVERTRKSVSGSNYHKPFVCTCSTGSNSDISAASKPVVNSLEDITLANICEKTLASIKRRRSSIIVPIGSVQFGVCRHRALLFKYLCDRMEPPLPCELVRGFLDYSPHAWNTIVVNRGDSQVRMLVDACRPHDIRGEEDPEFFCRYIPLSRTKVPISPDGTPGPSCSFPSLSTCDKFEKASSSTIVRCKFGSIEAAAKVRTLDLKESSPDKIKNFEYNCLGEVRILGSLKHPSIVEIYGHQISYKWTLSEDGNPEHCVLRSAIFMEHIEGGSLRTYLDKLSKAGEKHVPMELAFYIAKDVACALSELHSKHIIHRDVKSENILIDLDRKKDDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGTPPPYVCTGTPRWMAPEVMRTMYKENTYGLEVDIWSFGCLLVELLTLSIPYSGLSDLQFHDILQMGKPPQLTEELEALSSPNEPTMIRSSDEPEKPDAEVDTMKFLVDLFHRCVEENPAKRPTAKEIYDMLLDQTGRLKVQDVGKS 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0336 1121 MobiDBLite consensus disorder prediction 1 35 - -
Lele17g0336 1121 PRINTS Leucine-rich repeat signature 223 236 - -
Lele17g0336 1121 PRINTS Leucine-rich repeat signature 180 193 - -
Lele17g0336 1121 Gene3D Transferase(Phosphotransferase) domain 1 786 1117 - -
Lele17g0336 1121 Pfam Leucine rich repeat 203 260 IPR001611 GO:0005515
Lele17g0336 1121 Pfam Protein kinase domain 818 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0336 1121 Pfam Ethylene-responsive protein kinase Le-CTR1 660 741 - -
Lele17g0336 1121 MobiDBLite consensus disorder prediction 473 494 - -
Lele17g0336 1121 ProSiteProfiles Leucine-rich repeat profile. 179 200 IPR001611 GO:0005515
Lele17g0336 1121 SMART LRR_bac_2 200 219 - -
Lele17g0336 1121 SMART LRR_bac_2 223 242 - -
Lele17g0336 1121 SMART LRR_bac_2 177 196 - -
Lele17g0336 1121 SMART LRR_typ_2 81 104 IPR003591 -
Lele17g0336 1121 SMART LRR_typ_2 177 200 IPR003591 -
Lele17g0336 1121 SMART LRR_typ_2 247 273 IPR003591 -
Lele17g0336 1121 SMART LRR_typ_2 223 246 IPR003591 -
Lele17g0336 1121 Gene3D Ribonuclease Inhibitor 41 283 IPR032675 -
Lele17g0336 1121 SUPERFAMILY Protein kinase-like (PK-like) 792 1106 IPR011009 -
Lele17g0336 1121 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 107 1110 - -
Lele17g0336 1121 MobiDBLite consensus disorder prediction 17 35 - -
Lele17g0336 1121 MobiDBLite consensus disorder prediction 438 502 - -
Lele17g0336 1121 MobiDBLite consensus disorder prediction 458 472 - -
Lele17g0336 1121 SMART serkin_6 785 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0336 1121 ProSiteProfiles Protein kinase domain profile. 793 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0336 1121 SMART LRR_sd22_2 177 202 - -
Lele17g0336 1121 SMART LRR_sd22_2 223 244 - -
Lele17g0336 1121 FunFam Leucine-rich repeat protein kinase family protein 50 293 - -
Lele17g0336 1121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Lele17g0336 1121 SUPERFAMILY L domain-like 60 268 - -
Lele17g0336 1121 FunFam Leucine-rich repeat protein kinase family protein 831 1112 - -
Lele17g0336 1121 ProSiteProfiles Leucine-rich repeat profile. 225 246 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0336 Lele-ChrLele17 15861117 15869534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0336 813 1106 MAP Kinase Kinase Kinase AT2G24360 28.814 9.88e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Lele17g0336 Pkinase 9.5e-40 CL0016