Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0335 ATGTTCATTCCTTCCCCTTGGGATATTGTTCCTGATTTTTGTTTTCTTCTGGCTGTTTTATTCACATTTGGAGGCTGTCCTGTTGGTTTCAAATCTGTCTGTCTTCGTGATCAATTCTTTTATTCTGATGTTTTTTCCTTGTGTTTTTATCTGGCTTCATTTGTTCGCCTTCATCTCTGCGATTTTCGTTCTTTTGTAGGGCATAGGCCTACGGTGAAAATAGTCAAGACAGTTTTGCAAGGAAATACTGAAGCAACGGTACTCTGTGGCGGATACAAGTGGAAAAAAAAAACTGAACGACAAAGTGCTTCTGTGCAATTGGCATTTCCCAACGCTTGTGTCACCTTCGACGAGTGTGCTTTTGCGTATCCATTAGCGTCATCACTCAACAAGTCAGCCAACATGCCGGTGAGGCAAATGAAAGAAAGCTCGGAGCAGCATCTTGTTATCAAAACCCACTTGCAGAACTCCATAAATCCAGCAAAGAAAGCACCCAAAACAGGCCAAAATGGCAAAGGTCCACCACCTCAAGAACCTCACAACGCCAAACCCCATAGCCAGAGCCAACCTCTGCCCCCGGCAAAGAACAGAGGAAGAAGAAGGAGCCGGGGAGGCCGTAAGTCCGATCAAGGCGATGTTCCGATGCGACCCGCTTGTCGACCCTGCACTGTGGCTAATAAACCGCTATCAGAAAACCCGCGTCAGATTCTGGTATCAAGTACTGTAAATGGGCCGGTTGAAAATGGGGGCAACAACTCCTGTGACGTTGTGATGGGGTTTCCCACCTCAAGTAAATCTTTGAGCTTCGCTCCTAGGCCTGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGAGTTACCGGACAAGGACTTGAACCAGTATGATGTCACTATTACCCCAGAAGTGTCGTCTAGAACAGTAAACAGGGCCATCATGGCGGAACTCGTGAGACTGTACAAAGAGTCTGACTTGGGGATGAGACTCCCTGCGTATGATGGCAGAAAAGGTCTGTACACAGCAGGGGAGCTTCCCTTTGCTCGGAGAGAGTTTAAAATTAAGCTTGTAGATGAAGACGATGGAGTTAATGGTCCCAAAAGGGAAAGAGAATACAAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAGATTCTTGACATTGTACTAAGAGAGCTATCAACTAAGAGGTTTTGCCCTATTGGGAGGTCCTTCTTTTCACCAGATATTAGAACTCCTCAAAGGCTTGGAGAGGGATTGGAATCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCCTCGGCTGCGTTTATTGAGCCTCTTCCTGTTGTGGAATTTGTTGGTCAGCTGTTAGGAAAATATGTGTTGTCAAGGCCATTGTCTGATGCTGATCGTGTAAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGGAGTGTACGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGGGAACTTGTGTTTCCTGTTGATGACAACTCAACTATGAAATCAGTAGTTGAGTACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTACCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCAAACTATTTGCCTATGGAGGCATGCAAAATTGTTGAGGGGCAACGGTATACAAAAAGGTTGAATGAGAAGCAAATTACTGCTTTGCTGAAAGTTACTTGTCAGAGACCCCGTGATCGGGAAAATGACATTTTGCGGACCATTCAACATAATGCTTATGATCAAGATCCTTATGCAAAGGAGTTTGGGATTAAGATCAGTGAAAAATTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCATGGTTGAAATATCATGACACTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGGATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCACGAAATGTGCAAGATAGTGTTGCTCGCAGTTTTTGTACTGAACTCGCTCAGATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCAATATATAACGCCAAGCCTGAGCAGGTGGAGAAAGCTTTAAAGCATGTTTATCATGTTTCGATGAACAAAACCAAGGGGAAGGAATTAGAGCTTCTATTAGCAATATTGCCTGACAACAATGGCTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACTGACCTTGGTTTAATTTCTCAATGCTGCCTGACAAAGCATGTCTTTAAGATCACTAAACAGTATCTGGCTAATGTGTCTCTGAAGATCAATGTTAAGATGGGAGGTAGAAACACAGTTCTTCTGGACGCTATAAGCTGCAGAATACCATTGGTTAGTGACATTCCGACCATAATATTTGGAGCAGATGTTACACACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATAGCAGCTGTAGTAGCTTCCCAAGACTGGCCTGAAGTGACGAAATATGCCGGTTTAGTGTGTGCTCAAGCTCACAGACAGGAACTCATTCAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGCACGGTCAGCGGTGGCATGATCCGAGACTTGTTGGTCTCCTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAATTTTATCAAATTCTACTTTATGAGTTGGATGCAATCCGGAAGGCTTGTGCTTCCTTAGAGCCAAACTATCAGCCTCCAGTAACTTTTATTGTTGTACAAAAAAGACATCACACTAGGTTGTTTGCAAACAACCACAGGGACAAGAGCAGCACAGATAAGAGTGGGAATATATTGCCTGGAACCGTTGTTGATTCTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCCGGTATTCAGGGGACGAGTCGGCCTGCTCATTATCATGTCCTGTGGGATGAAAACAACTTTACAGCAGATGGAATCCAGTCTTTGACAAACAATCTATGTTATACATATGCTAGGTGTACCCGTTCCGTATCTGTTGTTCCTCCGGCATATTATGCACATCTAGCAGCATTTCGGGCCCGTTTCTATATGGAGCCAGACATGCAGGAGAATGGCTCTACCGGCGGTGGTAGCGTGGGTCATGGTCCCAAAGCAACCCGACCAGCTGGAGAATGTGGGGTCCGGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGGGTAATGTTTTATTGTTAG 3399 0.4404 MFIPSPWDIVPDFCFLLAVLFTFGGCPVGFKSVCLRDQFFYSDVFSLCFYLASFVRLHLCDFRSFVGHRPTVKIVKTVLQGNTEATVLCGGYKWKKKTERQSASVQLAFPNACVTFDECAFAYPLASSLNKSANMPVRQMKESSEQHLVIKTHLQNSINPAKKAPKTGQNGKGPPPQEPHNAKPHSQSQPLPPAKNRGRRRSRGGRKSDQGDVPMRPACRPCTVANKPLSENPRQILVSSTVNGPVENGGNNSCDVVMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKESDLGMRLPAYDGRKGLYTAGELPFARREFKIKLVDEDDGVNGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKYVLSRPLSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRNVQDSVARSFCTELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQILLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGSVGHGPKATRPAGECGVRPLPALKENVKRVMFYC 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0335 1132 FunFam Protein argonaute-2 470 596 - -
Lele17g0335 1132 Gene3D paz domain 470 595 - -
Lele17g0335 1132 Pfam PAZ domain 503 607 IPR003100 GO:0005515
Lele17g0335 1132 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 258 1087 - -
Lele17g0335 1132 Pfam Mid domain of argonaute 674 751 IPR032473 -
Lele17g0335 1132 SMART PAZ_2_a_3 481 613 IPR003100 GO:0005515
Lele17g0335 1132 MobiDBLite consensus disorder prediction 1090 1111 - -
Lele17g0335 1132 Pfam Argonaute linker 1 domain 425 474 IPR014811 -
Lele17g0335 1132 FunFam Argonaute 10 655 828 - -
Lele17g0335 1132 FunFam protein argonaute 10-like 834 1132 - -
Lele17g0335 1132 Gene3D - 834 1132 IPR036397 GO:0003676
Lele17g0335 1132 ProSiteProfiles PAZ domain profile. 477 591 IPR003100 GO:0005515
Lele17g0335 1132 MobiDBLite consensus disorder prediction 155 233 - -
Lele17g0335 1132 SMART Piwi_a_2 765 1086 IPR003165 GO:0003676
Lele17g0335 1132 SUPERFAMILY Ribonuclease H-like 755 1087 IPR012337 -
Lele17g0335 1132 SUPERFAMILY PAZ domain 471 631 IPR036085 GO:0005515
Lele17g0335 1132 CDD Piwi_ago-like 635 1085 IPR045246 -
Lele17g0335 1132 Pfam Piwi domain 766 1085 IPR003165 GO:0003676
Lele17g0335 1132 Pfam N-terminal domain of argonaute 281 415 IPR032474 -
Lele17g0335 1132 Pfam Argonaute linker 2 domain 617 663 IPR032472 -
Lele17g0335 1132 Gene3D - 655 828 - -
Lele17g0335 1132 CDD PAZ_argonaute_like 476 590 - -
Lele17g0335 1132 ProSiteProfiles Piwi domain profile. 765 1086 IPR003165 GO:0003676
Lele17g0335 1132 SMART DUF1785_2 424 476 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0335 Lele-ChrLele17 15835411 15843951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0335 135 1132 Eukaryotic Initiation Factors Gene Family AT5G43810 81.529 0.0 1659