Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0332 ATGCCATTTGTGACCAATTTGGAGACAATACAGAAACTTCTGATTGCTCCGAAGAATCTTAGCAAACCAAACAAAAAATGGCATTCTGCATTTGTTAGTATATATTGTTACAGAGCTCTCTTGTCTCACTTCAAATCCACTTTGCTTCCCACCACCACCACCACCACCATCAACAAGAAGAACTGGTCTAAGTTATCATCTTCTTCCTCCTACACTGTTATCGATCTAAACACAGATCATTCCTTTACTGTTACTCAAACCACCCTCACCAATCTCGTTAAGGACAAAGATGTAGAAGCACTCCAGAGTCTTGGTGGGTTCCACGACGTGGTATCTGCTCTCAAAACCGACGTTGAAAATGGTGTCAAAGGCGGTGATGGTGATGATGATGATGATGATTATGGCAATGACGTCATGCGACGCCGCGACGCGTTTGGTTCTAACACTTATCCAAAGCCACCTACGAGAGGTTTCTTCCATTTTGTGAGTGAAGGCTTCAAGGACCCCACCATTCTCATTCTCTTGGTTTGTGCCGCTCTCTCTCTTGGCTTCGGCATCAAGGAGAACGGAATCAAAGAAGGCTGGTACGAAGGTGGAAGCATCTTCGTTGCCGTTTTCCTCGTCATCGCTGTCTCTTCCATCAGTAACTTCAGGCAGAGCAGACAGTTCGAGAAGCTGTCCCAGGTTAGCAATAACATCCTGGTTGATGTTGTACGAAGTGGTCGCCGGCAACACGTTTCGATTTACGACATAGTGGTCGGTGATGTTGTTTTGCTTAAGATCGGAGACCAAGTTCCTGCTGATGGCTTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCAAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATTTCGACAATAACCCATTTTTGTTTTCTGGGACCAAAGTGGCTGATGGGTTTGCCAAAATGCTGGTTACTTCCGTTGGAACAAACACAACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACCCCATTGCAAGAACGCCTCAATAAGCTTACTTCTGCCATAGGCAAGGTTGGTTTGGCCGTGGCATTTCTTGTTCTTCTTGTTATGTTAGTTCGCTACTTCACAGGGAACACAACCGATGAGAACGGGAACAAAGAGTTCAACGGAAGAAGAACGAAGTTTGATGATATAATGAATGGAGTTGTGGGAATTGTTGCCGCTGCTGTTACCATTGTTGTGGTTGCAATTCCAGAAGGGCTTCCTCTGGCTGTGACTCTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGACATGGCTATGGTGAGGAAGCTCTCTGCTTGTGAGACTATGGGCTCTGCTACGACCATTTGTACTGATAAGACTGGCACTCTCACACTTAATCAGATGCAAGTGACTAAGTTCTGGCTTGGACAACAACCCATGGAAGAGAAACCTCATGAATCATCATCAGTTCATTCAGATGTTCTTCAATTGATCAAAGAAGGGGTTGCCCTAAATACTACAGGTAGTGTTTACAAGTCTAAATCAAGTGATTCTGAATATGAGTTTTCGGGTAGTCCAACGGAAAAGGCCATTCTTTCATGGGCTGTTCTTGATTTGAACATGAACATGGAGGAATTGACGCAGAGTTGTACCATCCTTCATGTGGAAGCCTTCAATTCAAAGAAGAAGAGAAGTGGGGTCTTGATTAGGAGGAAAGCAGACAAGAGAATCCATGCACATTGGAAAGGAGCAGCTGAGATGGTACTGAGATTATGTTCAAAGTACTATGATGCTTCTGGCAATATCAAAGATCTTGACACTGGAAAAATGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCCAGCAGCCTCAGGTGTATTGCTTTTGCACATACAGAAGAAGATGAAGAAGGAACCCAAAAGGTAAAAGAGGAAGGCCTCACACTCTTAGGTCTTGTGGGTATTAAGGATCCATGTCGTCCAGGTGTGAAGAAAGCTGTAAACAATTGCCAACAAGCAGGAGTAAATGTCAAGATGATCACAGGAGACAATGTTTTCACAGCAACAGAATGCGGAATCCTCCAACCTAATCAAGACACAACAGAAGCAGTCATCGAAGGAGAAGCATTCCGAAACTTGTCTCCCGAGGAAAGACTAAAGAGAGTGGAGAAAATCTCTGTGATGGCACGATCCTCCCCATTTGACAAGCTCCTCATGGTTCAATGCCTCAAACAGAAAGGCCATGTAGTTGCAGTCACAGGAGATGGCACCAATGATGCACCAGCATTAAAGGAAGCTGACATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTTGCAAAAGAAAGCTCAGATATAGTCATATTGGATGATAATTTCGCCTCGGTCGCCACAGTTCTCAAGTGGGGAAGATGAGCTTTAGCTCTTGCAACAGAGAAGCCAACAATGGAGTTATTGGACAAACCACCAGTGGGTAGAACTGAACCTCTCATCACCAACATCATGTGGAGAAATCTCTTAGCACAAGCTTTCTACCAGATCACAATTCTGTTAACGTTGCAGTTCAAGGGTGAAGATATATTTGGGGTGAGTTCAAAGGTAAATGACACTTTGATTTTCAACACATTTGTGCTGTGTCAGGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCAGATACTGAGAGGTTGAATTGGGGGCAGTGGGGTGTTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTGAAGTTCATTCCGGTTCCAAGAAAAACATTGCTCAGTTTCTTCAACATGAGGAGGCAATGA 2820 0.4418 MPFVTNLETIQKLLIAPKNLSKPNKKWHSAFVSIYCYRALLSHFKSTLLPTTTTTTINKKNWSKLSSSSSYTVIDLNTDHSFTVTQTTLTNLVKDKDVEALQSLGGFHDVVSALKTDVENGVKGGDGDDDDDDYGNDVMRRRDAFGSNTYPKPPTRGFFHFVSEGFKDPTILILLVCAALSLGFGIKENGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFEKLSQVSNNILVDVVRSGRRQHVSIYDIVVGDVVLLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINFDNNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGSISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLLVMLVRYFTGNTTDENGNKEFNGRRTKFDDIMNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMQVTKFWLGQQPMEEKPHESSSVHSDVLQLIKEGVALNTTGSVYKSKSSDSEYEFSGSPTEKAILSWAVLDLNMNMEELTQSCTILHVEAFNSKKKRSGVLIRRKADKRIHAHWKGAAEMVLRLCSKYYDASGNIKDLDTGKMLVFEQIIQGMAASSLRCIAFAHTEEDEEGTQKVKEEGLTLLGLVGIKDPCRPGVKKAVNNCQQAGVNVKMITGDNVFTATECGILQPNQDTTEAVIEGEAFRNLSPEERLKRVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRXALALATEKPTMELLDKPPVGRTEPLITNIMWRNLLAQAFYQITILLTLQFKGEDIFGVSSKVNDTLIFNTFVLCQVLMVEFLKKFADTERLNWGQWGVCILMAAISWPIGWVVKFIPVPRKTLLSFFNMRRQ 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0332 939 FunFam Calcium-transporting ATPase 467 660 - -
Lele17g0332 939 SFLD p-type atpase 439 807 IPR044492 -
Lele17g0332 939 Pfam Cation transporter/ATPase, N-terminus 108 181 IPR004014 -
Lele17g0332 939 Pfam haloacid dehalogenase-like hydrolase 454 769 - -
Lele17g0332 939 SUPERFAMILY Calcium ATPase, transmembrane domain M 105 925 IPR023298 -
Lele17g0332 939 Gene3D - 164 807 - -
Lele17g0332 939 Gene3D - 467 660 IPR023299 GO:0000166
Lele17g0332 939 Pfam Cation transporting ATPase, C-terminus 808 884 IPR006068 -
Lele17g0332 939 SUPERFAMILY Calcium ATPase, transduction domain A 233 331 IPR008250 -
Lele17g0332 939 FunFam Calcium-transporting ATPase 205 333 - -
Lele17g0332 939 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 73 807 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele17g0332 939 FunFam Plasma membrane calcium-transporting ATPase 2 657 800 - -
Lele17g0332 939 Pfam E1-E2 ATPase 235 435 - -
Lele17g0332 939 Gene3D - 870 928 - -
Lele17g0332 939 Gene3D - 808 868 - -
Lele17g0332 939 Gene3D - 137 333 - -
Lele17g0332 939 MobiDBLite consensus disorder prediction 121 148 - -
Lele17g0332 939 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 463 665 IPR023299 GO:0000166
Lele17g0332 939 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0332 939 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0332 939 PRINTS H+-transporting ATPase (proton pump) signature 614 632 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0332 939 SUPERFAMILY HAD-like 455 806 IPR036412 -
Lele17g0332 939 SFLD C1.7: P-type atpase like 439 807 - -
Lele17g0332 939 ProSitePatterns E1-E2 ATPases phosphorylation site. 459 465 IPR018303 -
Lele17g0332 939 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 726 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0332 939 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 399 492 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0332 939 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 201 374 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0332 939 PANTHER CATION TRANSPORTING ATPASE 882 925 - -
Lele17g0332 939 SMART Cation_ATPase_N_a_2 100 186 IPR004014 -
Lele17g0332 939 Gene3D - 454 800 IPR023214 -
Lele17g0332 939 PRINTS P-type cation-transporting ATPase superfamily signature 653 664 - -
Lele17g0332 939 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Lele17g0332 939 PRINTS P-type cation-transporting ATPase superfamily signature 457 471 - -
Lele17g0332 939 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Lele17g0332 939 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
Lele17g0332 939 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0332 Lele-ChrLele17 15785553 15788633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0332 10 939 Primary Pumps ATPases AT3G22910 60.078 0.0 1125