Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0331 ATGTCGATGCCCATCGTCAACAATTTGGAGCGGATACAGAAACTTTTGAATTCCCCTCAAAATCTGAGCAAACCCAACAAAAAATGGCATTCTGCTTTCGTTAGCATCTATTGTTCTCGAGCCCTCTTCTCTCACTTCGCTTCCACAATGTATCTATCCAACAAGAAAAGCTCTAAGTTATCACCTTCTTCCTCCTTCACTGTCATCGATGTAAACACAGATCCTTCCTTTTCTATTACTCAAACCACCCTCACCAACGTCATCAAGGACAGAAATGTAGAAACCCTGGAAAATCTTGGTGGGGTCCACGGCGTGGTATCTGCTCTCAAAACCGACGTTGAAAATGGAGTCAAAGGCGGTGATGGTGATGGTGATGATGATGATTATGGCAATGACGTCATGCGACGCCGCGACGCGTTTGGTTCTAACACTTATCCAAAGCCACCTACGAGAGGTTTCTTCCATTTTGTGAGTGAAGGCTTCAAGGACCCCACCATTCTCATTCTCTTGGTTTGTGCCGCTCTCTCTCTTGGCTTCGGCATCAAGGAGAACGGAATCAAAGAAGGCTGGTACGAAGGTGGAAGCATCTTCGTTGCCGTTTTCCTCGTCATTGCTGTCTCTTCCATCAGTAACTTCAGGCAGAGCAGACAGTTCGACAAGCTGTCCCAGGTTAGCAATAACATCCAGGTTGATGTTGTACGAAGTGGTCGCCGGCAACAAGTTTCGATTTACGACATCGTGGTCGGTGATGTTGTTTTGCTTAAGATCGGAGACCAAGTTCCTGCGGATGGCTTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCAAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATTTCGACAATAACCCATTTTTGTTTTCTGGGACCAAAGTGGCTGATGGGTTTGCCAAAATGCTGGTTACTTCCGTTGGAACGAACACAACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACCCCATTGCAAGAACGCCTCAATAAGCTTACTTCTGCCATAGGCAAGGTTGGTTTGGCTGTGGCATTTCTTGTTCTGGTTGTTATGTTAGTTCGCTACTTCACAGGGAACACAACCGATGAGAACGGGAACAAAGAGTTCAACGGAAGAAGAACGAAGTTTGATGATATAATGAATGGAGTTGTGGGAATTGTTGCCGCTGCTGTTACCATTGTTGTGGTTGCAATTCCAGAAGGGCTTCCTCTGGCTGTGACTCTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGACATGGCTATGGTGAGGAAGCTCTCTGCTTGTGAGACTATGGGCTCTGCTACGACCATTTGTACTGATAAGACTGGCACTCTCACGCTTAATCAGATGCAAGTGACTAAGTTCTGGCTTGGACAACAACCCATGGAAGAGAAACCTCATGAATCATCATCAGTTCATTCAGATGTTCTTCAATTGATCAAAGAAGGGGTTGCCCTAAATACTACAGGTAGTGTTTACAAGTCTAAATCAAATGATTCTGAATATGAGTTTTCAGGTAGTCCAACGGAAAAGGCCATTCTTTCATGGGCTGTTCTTGATTTGAACATGAACATGGAGGAATTGACGCAGAGTTGTACCATCCTTCATGTGGAAGCCTTCAATTCAAAGAAGAAGAGAAGTGGTGTCTTGATTAGGAGGAAAGCGGACAACAGAATCCATGCGCATTGGAAAGGAGCAGCTGAGATGGTACTGAGATTATGTTCAAAGTACTATGATGCTTCTGGCAATATCAAAGATCTTGACACTGGAAAAAAGTTGGTGTTTGAGCAAATCATTCAAGGAATGGCGGCCAGCAGCCTCAGGTGTATTGCTTTTGCACATACAGAAGAAGATGAAGAAGGAACCCAAAAGGTAAAAGAGGAAGGCCTCACACTCTTAGGTCTTGTGGGTATTAAGGATCCATGTCGTCCAGGTGTAAAGAAAGCTGTAAACAATTGCCAACAAGCAGGAGTAAATGTCAAGATGATCACAGGAGACAATGTTTTCACAGCAAAAGCCATAGCCACAGAATGCGGAATCCTCCAACCTAAGCAAGACACGAAAGAAGCAGTCATCGAAGGAGAAGCATTCCGAAACTTGTCTCCCGAGGAAAGACTAAGGAGAGTGGAGAAAATCTCTGTGATGGCACGATCCTCCCCATTTGACAAGCTCCTCATGGTTCAATGCCTCAAACAGAAAGGCCATGTAGTTGCAGTCACAGGAGATGGCACCAATGATGCACCAGCATTAAAGGAAGCTGACATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTTGCAAAAGAAAGCTCAGATATAGTCATATTGGATGATAATTTCGCCTCGGTCGCCACAGTTCTCAAGTGGGGAAGATGTGTCTATAACAACATCCAAAAGTTCATCCAGTTTCAGCTTACAGTAAATGTTGCAGCTCTTGTAATTAACTTCGTGGCGGCAGTATCAGCCGGAGAAGTGCCGTTAACAGCAGTTCAACTTTTGTGGGTGAACCTGATAATGGACACTTTAGGAGCTTTAGCTCTTGCAACAGAGAAGCCAACAATGGAGTTATTGGACAAACCACCAGTGGGTAGAACTGAACCTCTCATCACCAACATCATGTGGAGAAATCTCTTAGCACAAGCTTTCTATCAGATCACAATTCTGTTAACGTTGCAGTTCAAGGGCGAAGATATATTTGGGGTGAGTTCAAAGGTAAATGACACTTTGATTTTCAACACATTTGTGCTGTGTCAGGTGTTTAATGAGTTCAATGCGAGGAAGCTGGAGAAGAAGAATGTGTTCCAGGGGATTCATAAGAACAAGCTGTTCATGGGGATAATAGGGATAACCATAGTGCTTCAAGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCAGATACTGAGAGGTTGAATTGGGGGCAGTGGGGTGTTTGCATTTTAATGGCAGCTATTTCTTGGCCTATTGGTTGGGTTGTGAAGTTCATTCCGGTCCCAAGAAAACCATTGCTCAGTTTCTTCAACATGAGGAGGCAATGA 3078 0.4441 MSMPIVNNLERIQKLLNSPQNLSKPNKKWHSAFVSIYCSRALFSHFASTMYLSNKKSSKLSPSSSFTVIDVNTDPSFSITQTTLTNVIKDRNVETLENLGGVHGVVSALKTDVENGVKGGDGDGDDDDYGNDVMRRRDAFGSNTYPKPPTRGFFHFVSEGFKDPTILILLVCAALSLGFGIKENGIKEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRQQVSIYDIVVGDVVLLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINFDNNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGSISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLVVMLVRYFTGNTTDENGNKEFNGRRTKFDDIMNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMQVTKFWLGQQPMEEKPHESSSVHSDVLQLIKEGVALNTTGSVYKSKSNDSEYEFSGSPTEKAILSWAVLDLNMNMEELTQSCTILHVEAFNSKKKRSGVLIRRKADNRIHAHWKGAAEMVLRLCSKYYDASGNIKDLDTGKKLVFEQIIQGMAASSLRCIAFAHTEEDEEGTQKVKEEGLTLLGLVGIKDPCRPGVKKAVNNCQQAGVNVKMITGDNVFTAKAIATECGILQPKQDTKEAVIEGEAFRNLSPEERLRRVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRTEPLITNIMWRNLLAQAFYQITILLTLQFKGEDIFGVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHKNKLFMGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCILMAAISWPIGWVVKFIPVPRKPLLSFFNMRRQ 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0331 1025 FunFam Calcium-transporting ATPase 200 328 - -
Lele17g0331 1025 Pfam Cation transporting ATPase, C-terminus 839 1009 IPR006068 -
Lele17g0331 1025 Gene3D - 159 1009 - -
Lele17g0331 1025 SUPERFAMILY Calcium ATPase, transmembrane domain M 100 1012 IPR023298 -
Lele17g0331 1025 CDD P-type_ATPase_Ca_PMCA-like 135 887 - -
Lele17g0331 1025 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Lele17g0331 1025 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Lele17g0331 1025 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Lele17g0331 1025 PRINTS P-type cation-transporting ATPase superfamily signature 275 289 - -
Lele17g0331 1025 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Lele17g0331 1025 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Lele17g0331 1025 SFLD C1.7: P-type atpase like 434 807 - -
Lele17g0331 1025 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 660 IPR023299 GO:0000166
Lele17g0331 1025 Gene3D - 449 799 IPR023214 -
Lele17g0331 1025 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 196 369 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0331 1025 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 394 487 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0331 1025 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 725 835 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0331 1025 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0331 1025 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0331 1025 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele17g0331 1025 FunFam Calcium-transporting ATPase 771 1013 - -
Lele17g0331 1025 FunFam Calcium-transporting ATPase 649 799 - -
Lele17g0331 1025 SUPERFAMILY Calcium ATPase, transduction domain A 227 326 IPR008250 -
Lele17g0331 1025 SMART Cation_ATPase_N_a_2 98 181 IPR004014 -
Lele17g0331 1025 Gene3D - 132 328 - -
Lele17g0331 1025 SFLD p-type atpase 434 807 IPR044492 -
Lele17g0331 1025 PANTHER CATION TRANSPORTING ATPASE 64 1011 - -
Lele17g0331 1025 FunFam Calcium-transporting ATPase 462 655 - -
Lele17g0331 1025 Pfam haloacid dehalogenase-like hydrolase 449 768 - -
Lele17g0331 1025 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Lele17g0331 1025 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 91 1011 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele17g0331 1025 Gene3D - 462 655 IPR023299 GO:0000166
Lele17g0331 1025 Pfam Cation transporter/ATPase, N-terminus 100 176 IPR004014 -
Lele17g0331 1025 SUPERFAMILY HAD-like 450 859 IPR036412 -
Lele17g0331 1025 Pfam E1-E2 ATPase 229 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0331 Lele-ChrLele17 15773244 15776321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0331 12 1025 Primary Pumps ATPases AT3G22910 68.333 0.0 1342