Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0307 ATGGAACCAGGCGCCCCTCAGCCGCCGTCGACACTCCCGGCACCTCCGGCCTCACCCTCTCCCTCCTCCTCCGCCGTCACCATCCTCGGAAAGTACCAGTTGATCCGTCTCCTAGGTCGTGGCAGCTTCGCCAAGGTTTACCAGGCTCGATCCTTAATTGATGGCTCCATCGTCGCTGTGAAGATCATCGACAAGTCGAAAACCGATGCCTCCATGGAGCCTCGGATTGTTCGTGAGGTCGATGCAATGCGACGGCTTCACGACCATCCACATGTTCTTAAAATCCATGAGGTTTTGGCTACGAAGACAAAGATCTACCTGATTGTGGAGTTCGCTGCTGGCGGGGAGTTATTCTCGAAGATCTCGCGTAAAGGCCGGTTGACGGAACAGGTGGCGCGGCGGTACTTTCAGCAATTAGTTTCCGCCCTCTGTTTCTGCCACAAAAACGGCGTCGCACACCGTGATGTGAAGCCTCAGAATCTTCTTTTGGACCAGGAAGGGAATCTGAAGGTGTCCGATTTCGGACTCTCCGCCTTACCGGAACAGCTTAAAAACGGTTTGCTGCACACGGCCTGTGGCACGCCGGCTTATACCGCGCCGGAGATCCTCTTCCGGCGCGGATACGACGGCTCGAAAGCCGACGCGTGGTCGTGCGGGCTTATACTCTACGTACTGCTAGCAGGCTACCTCCCGTTCTCCGACGCCAACATCCCTGAGATGTGCAAGAAGATCAGCCGGCGCGATTACCAGTTCCCGGAGTGGATATCCAAACCGGCCCGGTTCGTGATTAACCGACTACTCGAACCGAACCCGAAGAATCGGATTAGTCTAGAATCTCTCTATCAAAACTCGTGGTTCAAGAAATCGCTAAAGCCCCAACCCGACGAGAGCTTATTCGAGTCGGGTCCCACCTCTAAATCGTATCAAAAGCTGGAAAGAATGGGTTCGGGCGTGAACGCATTCGACATAATCTCCATGTCGTCAGGTTTGGACCTGACGGGGTTGTTTGAAACGACGTCGGATGACAGGAGAGAAAAGAGATTCACAACGAATGCTTCACTGAAGGTAGTGGAAGAGAAAGTGAAGGAAGTAGGAGGAATTTTAGGATTCAAAGTTGAGATAGGTAAGAACGGAGCTATTGGATTTGGGAAAGGAAAAGTGGTTCTTGTGGTGGAGGTGTTTGAGGTAGTTCCTGACTTGTTAATGGTGACAGTGAAAGTGATAAATGGTGGGTTTGAATTTGATGAACTTCACTGGGGAGACTGGAAATCTGGGCTTAAAGATGTTGTTCTTTCATGGCACAATGAATCACTGTGA 1317 0.5178 MEPGAPQPPSTLPAPPASPSPSSSAVTILGKYQLIRLLGRGSFAKVYQARSLIDGSIVAVKIIDKSKTDASMEPRIVREVDAMRRLHDHPHVLKIHEVLATKTKIYLIVEFAAGGELFSKISRKGRLTEQVARRYFQQLVSALCFCHKNGVAHRDVKPQNLLLDQEGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILFRRGYDGSKADAWSCGLILYVLLAGYLPFSDANIPEMCKKISRRDYQFPEWISKPARFVINRLLEPNPKNRISLESLYQNSWFKKSLKPQPDESLFESGPTSKSYQKLERMGSGVNAFDIISMSSGLDLTGLFETTSDDRREKRFTTNASLKVVEEKVKEVGGILGFKVEIGKNGAIGFGKGKVVLVVEVFEVVPDLLMVTVKVINGGFEFDELHWGDWKSGLKDVVLSWHNESL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0307 438 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0307 438 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Lele17g0307 438 MobiDBLite consensus disorder prediction 1 20 - -
Lele17g0307 438 Gene3D Kinase associated domain 1, KA1 315 431 - -
Lele17g0307 438 Gene3D Phosphorylase Kinase; domain 1 35 116 - -
Lele17g0307 438 Pfam NAF domain 318 373 IPR004041 GO:0007165
Lele17g0307 438 FunFam Non-specific serine/threonine protein kinase 314 431 - -
Lele17g0307 438 FunFam Non-specific serine/threonine protein kinase 25 116 - -
Lele17g0307 438 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0307 438 Gene3D Transferase(Phosphotransferase) domain 1 117 306 - -
Lele17g0307 438 CDD STKc_AMPK-like 31 285 - -
Lele17g0307 438 CDD CIPK_C 319 427 - -
Lele17g0307 438 SUPERFAMILY Protein kinase-like (PK-like) 28 295 IPR011009 -
Lele17g0307 438 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0307 438 MobiDBLite consensus disorder prediction 1 22 - -
Lele17g0307 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Lele17g0307 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 26 406 - -
Lele17g0307 438 FunFam Non-specific serine/threonine protein kinase 22 314 - -
Lele17g0307 438 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0307 Lele-ChrLele17 15430034 15431350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0307 11 436 Miscellaneous Gene Families AT3G23000 56.782 1.59e-165 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele17g0307 Pkinase 1.5e-69 CL0016