Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0302 ATGAATACTATTGGAGTTCACGTCGTGTTCCCCGTGTTCTGTAAGTGCCCTAACACCACGCAATCGCGAAACGGAGAGAACATCCTGATTTCCTACGTGGTTCAACCGAATGATACCGTATCCTCGATTGCCAACTCTTTTGGATCGAAACCGCAGTCAATAATTAATGCTAACCGTAAAAATTTCCAAGAATTTGATACTATCTTCGTTCCGGTGTCCCGATTGCCGGTGCTGCCACAGCTTCCGGTTAACACTTCGGCGCCGCCGGCTTCGTCCCCTGCTGCAACACCTGTAACTTCCGGTGACAGAACAGGAACAGTTAGAGGATTGGCGATTGGGTTAGGGATTGTGGGGTTACTGTTGATTCTGGGTTTGGGGCTGTGGGTTTACAGAGAGGCTCTATTCAAGGAAAGATCGGCGACGGTGGTTGGAGATGAAGAGAAGCAGAAGAAGCAGAGCTTTGTGAAGGAGACGAAGGGATCGAGGGAGGAGGAGGCGAAATTGATGGCGAATGTGTCAGATTGTTTGGATAAGTATAGGGTGTTTGGGTATGAAGAACTGAGAGAAGCTACAAATGGGTTTGATCAGAGTTGCTTGATTCTTGGGTCTGTGTATAAAGGAACCATTGATGGAGAGGTTTATGCGATCAAGAAGATGAAGTGGAATGCTTACGAGGAGCTCAAGATCTTACAAAAGGTGAACCATGGGAATTTGGTGAAGTTAGAGGGCTTTTGCATTGATAACGACGAACCAAACTGCTATCTAGTCTATGAATATGTTGAAAACGGATCCCTCTACTCATGGCTACACGAAGACCGGACTGAACGGTTGAACTGGAAGATGAGACTACACGTTGCCATCGATGTAGCCAACGGGATGCAATACATCCACGAGCACACGAGGCCAAGGGTTGTTCACAAAGACATCAAGGGTAGCAACATCCTCTTAGATGCCAACATGAGAGCCAAGATAGCTAATTTTGGACTTGCAAAGTCCGGAATGAATGCCATCACAATGCACATTGTGGGAACCCCAGGTTACATAGCCCCTGAATATCTAGCTGATGGCGTCGTTTCAACCAAGATGGATGTGTTCGCCTTTGGGGTGGTTCTGCTCGAACTAATCACGGGCAAAGAAGCCGTTGACAATAGAGGGAATACCTTGTGGACGAGCGTGGCCAGAGCTTTTGAAGTGGGTAGTGAGCATGAGAAGAGCGAGAGACTGAGGGAGTGGTTGGATAGTTCTCTTTTAAGAGAGACATGTTCAATGGAGAGTCTCATGGGTGTGCTTAATATTGCCCTTGCTTGCTTGCATAAGAATCCAACAAAGAGGCCAAGTATGGTGGAGATTGTTTATGCTTTGAGTAAGAGTGAAGATTCAGATTTTGATACCTCAGATGATACCATAGGTTCTCCATTGGTCAGCAAGGTGAATCAACTAGATTGCTCATAA 1452 0.4642 MNTIGVHVVFPVFCKCPNTTQSRNGENILISYVVQPNDTVSSIANSFGSKPQSIINANRKNFQEFDTIFVPVSRLPVLPQLPVNTSAPPASSPAATPVTSGDRTGTVRGLAIGLGIVGLLLILGLGLWVYREALFKERSATVVGDEEKQKKQSFVKETKGSREEEAKLMANVSDCLDKYRVFGYEELREATNGFDQSCLILGSVYKGTIDGEVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDNDEPNCYLVYEYVENGSLYSWLHEDRTERLNWKMRLHVAIDVANGMQYIHEHTRPRVVHKDIKGSNILLDANMRAKIANFGLAKSGMNAITMHIVGTPGYIAPEYLADGVVSTKMDVFAFGVVLLELITGKEAVDNRGNTLWTSVARAFEVGSEHEKSERLREWLDSSLLRETCSMESLMGVLNIALACLHKNPTKRPSMVEIVYALSKSEDSDFDTSDDTIGSPLVSKVNQLDCS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0302 483 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 460 - -
Lele17g0302 483 Pfam Protein kinase domain 202 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0302 483 ProSiteProfiles Protein kinase domain profile. 176 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0302 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Lele17g0302 483 CDD LysM 30 59 IPR018392 -
Lele17g0302 483 SMART LysM_2 31 71 IPR018392 -
Lele17g0302 483 Gene3D Phosphorylase Kinase; domain 1 161 259 - -
Lele17g0302 483 FunFam PTI1-like tyrosine-protein kinase 3 260 468 - -
Lele17g0302 483 ProSiteProfiles LysM domain profile. 30 77 IPR018392 -
Lele17g0302 483 Pfam LysM domain 32 64 IPR018392 -
Lele17g0302 483 SUPERFAMILY Protein kinase-like (PK-like) 178 454 IPR011009 -
Lele17g0302 483 Gene3D LysM domain 29 71 IPR036779 -
Lele17g0302 483 Gene3D Transferase(Phosphotransferase) domain 1 260 471 - -
Lele17g0302 483 SMART serkin_6 194 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0302 Lele-ChrLele17 15378795 15383691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0302 3 471 Receptor kinase-like Gene Family AT2G33580 32.422 3.28e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele17g0302 Pkinase 3.3e-42 CL0016