Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0295 ATGGAAAACAAAGTGGCTTATGAGAATGATCTCAATCTCAAGGATACAGAGCTCAGATTGGGGTTACCAGGAAGAAGAGAAGAAGAAGAACAACAACAATCATTGGTTAGCTCTAAGAACAACAAGAAGAGGCATTTATCTGAAGCTTCTGAGGATTGTGGGAAAAAGGGTTCTAATGAATCAGCTCCTCCAGCCAAGGCAAAGATTGTGGGGTGGCCACCAATCAGATCTTACAGGAAGAACAGCTTGCAGGAGGCTGAGGCTTCTGGGATTTATGTGAAAGTGAGCATGGATGGAGCTCCTTACCTCCGAAAGATTGATTTGAAGGTTTACAATGGCTATCCAGAACTCCTCAAAGCTTTAGAAAACATGTTCAAGTTAACCATAGGTCAGTACAATGAAAGAGAGGGTTACAAAGGTTCAGAATTTGCACCTACATATGAGGACAAGGATGGTGACTTGATGCTTGTTGGAGATGTTCCATGGGACATGTTTATGACTACCTGCAAAAGACTAAGAATCATGAAAGGATCAGAAGCTAGAGGATTGGGTTGTGGAGTATGA 564 0.422 MENKVAYENDLNLKDTELRLGLPGRREEEEQQQSLVSSKNNKKRHLSEASEDCGKKGSNESAPPAKAKIVGWPPIRSYRKNSLQEAEASGIYVKVSMDGAPYLRKIDLKVYNGYPELLKALENMFKLTIGQYNEREGYKGSEFAPTYEDKDGDLMLVGDVPWDMFMTTCKRLRIMKGSEARGLGCGV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0295 187 FunFam Auxin-responsive protein 85 187 - -
Lele17g0295 187 MobiDBLite consensus disorder prediction 16 67 - -
Lele17g0295 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 181 IPR003311 GO:0005634|GO:0006355
Lele17g0295 187 SUPERFAMILY CAD & PB1 domains 81 176 - -
Lele17g0295 187 Pfam AUX/IAA family 48 184 IPR033389 -
Lele17g0295 187 Gene3D - 84 187 - -
Lele17g0295 187 ProSiteProfiles PB1 domain profile. 90 177 IPR000270 GO:0005515
Lele17g0295 187 MobiDBLite consensus disorder prediction 16 33 - -
Lele17g0295 187 MobiDBLite consensus disorder prediction 41 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0295 Lele-ChrLele17 15239370 15240249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0295 93 186 B3 DNA Binding Superfamily AT4G23980 34.043 2.21e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele17g0295 AUX_IAA 1.2e-52 CL0072