Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele17g0293 | ATGGCAACTTTGAATCTGAAGGAGACGGAGCTGTGTCTGGGATTACCTGGAGGTGGTGGTGGCGGCAGCGGTGAGGTGGTGGAAACCACCGCCACCACCACTCCCAAGGCCTCAGGGAACAAGAGATCCTTCTCTGCAACTGTTGATCTCAAGCTCAACCTCTCCCACGATTCCAAGGACGCCGCCGGCGAAGAAGACGAAGAAGAAGATCTCACCAATCAGGACCACCACAAGAATATCGCCTCCTCCAAGAAGGACACAACTAAGCCACCTGCTAAGGCACAAGTGGTAGGTTGGCCACCAGTGAGGTCATACAGGAAGAACGTGATGTCACATAATAATAAGGTGAGTAGTGAAGATGGGAATACTGAGAAGAAGACGGCGCTGCCGGCTCCGGTGACCGGATCAGGATCATTTGTGAAGGTCTGTATGGATGGTGCACCCTACCTTAGGAAGGTGGACTTGAAGATGTACAAAAGCTACCAACAACTTTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCCTGGGGAAGTACGAGGGGCCCCAAGGAATGATAAACTTCATGAATGAGAGCAAGTTGATGGATCTGCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGGGATTGGATGCTCGTTGGCGATGTCCCATGGGAGATGTTCGTTGATTCATGCAAGCGTCTCCGAATAATGAAAGGATCAGAAGCCATTGGATTGGCCCCAAGAGCCATGGAAAAATGCAAAAGCATCAGAAGCTGA | 774 | 0.5052 | MATLNLKETELCLGLPGGGGGGSGEVVETTATTTPKASGNKRSFSATVDLKLNLSHDSKDAAGEEDEEEDLTNQDHHKNIASSKKDTTKPPAKAQVVGWPPVRSYRKNVMSHNNKVSSEDGNTEKKTALPAPVTGSGSFVKVCMDGAPYLRKVDLKMYKSYQQLSDALAKMFSSFTLGKYEGPQGMINFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSIRS | 257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele17g0293 | 257 | MobiDBLite | consensus disorder prediction | 26 | 52 | - | - | |
| Lele17g0293 | 257 | Gene3D | - | 133 | 250 | - | - | |
| Lele17g0293 | 257 | ProSiteProfiles | PB1 domain profile. | 137 | 238 | IPR000270 | GO:0005515 | |
| Lele17g0293 | 257 | Pfam | AUX/IAA family | 8 | 247 | IPR033389 | - | |
| Lele17g0293 | 257 | FunFam | Auxin-responsive protein | 133 | 248 | - | - | |
| Lele17g0293 | 257 | MobiDBLite | consensus disorder prediction | 1 | 130 | - | - | |
| Lele17g0293 | 257 | SUPERFAMILY | CAD & PB1 domains | 133 | 237 | - | - | |
| Lele17g0293 | 257 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 4 | 243 | IPR003311 | GO:0005634|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele17g0293 | Lele-ChrLele17 | 15202838 | 15205147 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele17g0293 | 134 | 246 | B3 DNA Binding Superfamily | AT4G23980 | 30.088 | 3.74e-08 | 52.0 |
Transcription factors information