Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0266 ATGAACAATTCAGAGATTAAGCTCACATCAGAAATTTTAATGGAAGAAGACTGTACTGGTCATCGTCGTCGTCATCATCAAGAACAAGATGCAGAAGAATATGGCTCTAAAGGCACATCATCAACTAAACGCTCTTATTATGGCTGCTCATTCTGCAAGCAAGGCTTTACAAATGCACAGGCATTAGGAGGCCACATGAACATTCACAGAAAGTACAGAGTAATCAAGAAGAAAACCAAGCAAGAACAAGCCGAGTTTGGTCTGACTCTCCAAATTGGTCCACCTTGTGAGGATGTTAATGGCGATAGCTCAGTGATAAGTCTGGAAGAAGATGGTGAAGTACTGGACTTAGAGCTCAGACTTGGTCACCATCCATCCTAA 381 0.4199 MNNSEIKLTSEILMEEDCTGHRRRHHQEQDAEEYGSKGTSSTKRSYYGCSFCKQGFTNAQALGGHMNIHRKYRVIKKKTKQEQAEFGLTLQIGPPCEDVNGDSSVISLEEDGEVLDLELRLGHHPS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0266 126 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Lele17g0266 126 PANTHER OS07G0101800 PROTEIN 27 79 - -
Lele17g0266 126 Gene3D Classic Zinc Finger 33 89 - -
Lele17g0266 126 SUPERFAMILY beta-beta-alpha zinc fingers 43 73 IPR036236 -
Lele17g0266 126 MobiDBLite consensus disorder prediction 16 43 - -
Lele17g0266 126 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Lele17g0266 126 MobiDBLite consensus disorder prediction 16 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0266 Lele-ChrLele17 14909733 14910214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0266 47 89 C2H2 Transcription Factor Family AT5G43540 62.791 8.44e-13 59.3