Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele17g0262 | ATGATGGAGGCAGATTCTTTGTCCGAGTCGATCAAGAAGGTTCAGTCACGATTCGATTTCGAGGTTCCTGAACCGGCTGTTCGTCTAGCTCTGACGGAATCTCTGTTCGACGTGGATGCTGCTGTGGAGTTTCTCAACAACAATCCAGGGTTTCTGGCCCGACCCGTCACTGTTGTTCGGGCCGTTACTAGCACTGGTTCTCGGATTCTGGCACCGACGCCGGTAAAGCAAGAGGGGTACGATGAATCGCAAATGTTCGATGAAATGAGTCTGAAGAGCAAGGTGAAAGAGGAACCCGTTGATTTGGCGCTTGAGAATCAAGCCCAAAATCCAGCGAAAGCAGAAAATGGTTCCGATGATTCTCATGAAGGTGCAAAACCGCTCGAGGAGTTGAATGTGAAGAAAGAAGCGAATGAAGAAATCAACGTCGAACCCGAGAAGCTGCTTTCTGTGCATGTTGAAATGGATGTTGATGTTTCTAGTTCAGTGCCATCCCAAACCCAGATTCAAGAGTCTACTGCTATTCAGAAATCTTCATGGGAAGCTGGATATGAAGAGTTCCTTAAGGCTTCTGATGCAAAAGTTATATCAAAGGAAGACTATTTAAAGTCTATTGGGGAACAACAGCAACAACCATCACCATCAGTTCAGGCTGAAGCTTGTAAAGCAAAGCAGGATACGAAGAAGGTCTTTGACAAGAAAGAAGTCTCTACCTGTGATAGAGGTGAAGTAAAAATCATCAAAGAAGTTGGTTTCTTTCCATGTTTTCGGAAATCATCTTCGCAGGTAAAAACTAAGGTTGTAGAGAAGATTGAACCTAGACCTCCAAACGTGGAGGATGGGGACTTTCCAGTAGAACCAGACTGGTTTTTAGTGGGAAGGACAATAGTCACTGCAATTTCAACTACCAAAGGGAAGAAACTAGTGGACAATGAGATTGTAAACTTTGATTTCCAATCTGTATTTGCGAAACACAAATCAAGATGGATTCTTCGCATTTCAACCAAGCGTTCTGGGGAGGTTGGATGGGTTAATAGGGAATGGGCTGAAAAGGTTGTTCCACTTATTCGTTCTGCAAAGGTCAAGGTTAGAGGTCGATGCATAGCTGCACCACCTGTCTTACAAATGATGCAAGAAGTCATGTTGTGTGTTAGCTTTTACATTCATCACACTGCATTCACTTCTGAAGTCAATACTTCATGGAGGCTTGATGGATCTTCTTACATTGAACCTTCTGTTTATCCTCTTCCCCGAGTGTTCAAATTGATAGACATGAAGCCTTATCAGAATGCTGCTTTTACCCCAGGGGAACTTGATTCTAGGAAACGTTTGTTCAGTAGCACGGGTAATACGGATGAAGCTGCTTCAGATTTACCTGGCTTGAAACGGAGAAAGGGCTGTCCTCCAGATCAAGATGATGAACAAGCGGTGTCACAGTCATCATTGAATAAGCTTGTTGGAGCAGCTGAAGTCTACGACTTGGAGGAGATGGAAGGGCCAAGCACACTGATGTGTGATCTAAAGCCTTACCAGAAACAAGCACTGCATTGGATGTCAGAACTTGAGAAAGGAACTAATGCTAAGAATGCTGAAAGTACTCTTCATCCTTGCTGGGCAGCCTATTGTATTGATGATGAGAGAGTTCCCACTGTTTACGTAAACAACTTCACAGGGGAAGCAACAACTAAGCTCCCGCCTGCATTTCGTTTGCCAAGAGGAGGAATTCTCGCAGATGCTATGGGACTTGGGAAGACTGTCATGACTATTGCTCTAATTCTTGCAAGACAAGGGAGAGGAGATGATTGTGGTCATTCAAGAAAGAGGAACCAAGTTTCTCGTACTGACCCCACATTCAAAGTTGATGGCGGCACTCTTGTTGTTTGTCCCATGGCATTGCTAGGTCAATGGAAGGACGAGCTTGAAACCCATTCCAAGCCAAGAAGTTTATCTATTTTTGTTCACTACGGCGGGGATAGAACTAATGATCCTCGGGTGATCTCAGGGCATGATGTCGTTTTAACAACATATCGTGTCCTAGGAGATGCATATAAAACTTATCGAGAAAACAGCATTTACCATAAGGTCAACTGGCATAGGGTGGTCCTAGACGAAGCTCATTCCATTAAAGCCTATAAATCACATGCTGCACAAGCTGCTTTTACGCTGACCTCACACTGCCGTTGGTGTCTTACCGGAACCCCTCTACAGAATAGCTTGGAAGACCTATTCAGCCTCTTGTGCTTCTTGCATGTTGAACCATGGGGCAATTTTGCGTGGTTTAATAAATTGGTTCAACGGCCTTATGAGAATGGTGATCCTCGAGGCTTGAAATTAATCAAGGCCATTTTGCAGCCATTGATGTTAAGAAGAACAAAGGAAACAAAGGATAAATGTGGAAGGCCCATACTTATTCTTCCACCAACTGACATCCAATTAGTTGAGTGTGAACAGTCAGCAGCTGAAGCTGAATTGTATAATGCCCTCTTCAGGAAATCTAAACATCAATTCGATGAGTATGTTGGGCAAGGAAAAGTTCTCAGCAACTATGCCAATATTCTCGAGTTATTATTGCGGTTGAGACAATGTTGTAACCATCCGTTTCTGGTCACAAGCCGAAGTGACTCGAAGAAACCTGTGGACTTTGACATACTCGCGAAAAGACTACTCGAGTTCAACTGTAATTCTACAAGTCAGAGTGCATATGTTACAGAGGCCATAGAGGCTCTTCGCAGGGGTGAAAAGCTAGAATGTCCAATATGCTTAGAATCTGCAGATGATCCTGTCTTCACTCCATGTGCACACAGAATGTGTAGGGAATGCTTACTTTCCAGCTGGAGTGACCAAATCAGTGGTCCTTGTCCTCTCTGTCGTCTCAAACTGAACAAAACTGATCTAATCAATTGTCCTTTTGAGAACCAGTTCGTGGTTACTGATGTTGAGAAGGAATGGAAGGAATCTACCAAGGTTTCAAAGCTTTTGGAACACTTGGAACGAATTCAGCGATATCGCCCTGCTGAAAAAAGCATTGTGTTCAGCCAGTGGACTTGCTTTTTGGACCTCCTGGAGATTGCTTTGAAGAAGAAAGGAATTGGCTATTTTAGATTTGATGGGAAACTGCAACAAAAGAACAGGGAAAAAGTTTTGAAGGAGTTTAATGAGTCAAGAGAGGAAAGGGTTTTGTTGATGTCACTTAAAGCTGGTGGTGTAGGCTTGAACTTGACTGCAGCCTCAAATGTTTTCATGATGGATCCATGGTGGAATCCTGCCGTTGAAGAGCAGGCAATTATGAGAATCCATCGCATAGGACAAAAGCGAACAGTTATGGTCAGAAGATTCATTGTCAAGGATACGGTCGAAGAGAGGCTGCAACAAGTGCAAGCGAAGAAGCAGAAGATGATATCTGGAGCCCTCACAGAAGATGAGGTTAGGTCAGGTAGGATTGAAGACCTCATGATGCTGTTCAGTTGA | 3468 | 0.4377 | MMEADSLSESIKKVQSRFDFEVPEPAVRLALTESLFDVDAAVEFLNNNPGFLARPVTVVRAVTSTGSRILAPTPVKQEGYDESQMFDEMSLKSKVKEEPVDLALENQAQNPAKAENGSDDSHEGAKPLEELNVKKEANEEINVEPEKLLSVHVEMDVDVSSSVPSQTQIQESTAIQKSSWEAGYEEFLKASDAKVISKEDYLKSIGEQQQQPSPSVQAEACKAKQDTKKVFDKKEVSTCDRGEVKIIKEVGFFPCFRKSSSQVKTKVVEKIEPRPPNVEDGDFPVEPDWFLVGRTIVTAISTTKGKKLVDNEIVNFDFQSVFAKHKSRWILRISTKRSGEVGWVNREWAEKVVPLIRSAKVKVRGRCIAAPPVLQMMQEVMLCVSFYIHHTAFTSEVNTSWRLDGSSYIEPSVYPLPRVFKLIDMKPYQNAAFTPGELDSRKRLFSSTGNTDEAASDLPGLKRRKGCPPDQDDEQAVSQSSLNKLVGAAEVYDLEEMEGPSTLMCDLKPYQKQALHWMSELEKGTNAKNAESTLHPCWAAYCIDDERVPTVYVNNFTGEATTKLPPAFRLPRGGILADAMGLGKTVMTIALILARQGRGDDCGHSRKRNQVSRTDPTFKVDGGTLVVCPMALLGQWKDELETHSKPRSLSIFVHYGGDRTNDPRVISGHDVVLTTYRVLGDAYKTYRENSIYHKVNWHRVVLDEAHSIKAYKSHAAQAAFTLTSHCRWCLTGTPLQNSLEDLFSLLCFLHVEPWGNFAWFNKLVQRPYENGDPRGLKLIKAILQPLMLRRTKETKDKCGRPILILPPTDIQLVECEQSAAEAELYNALFRKSKHQFDEYVGQGKVLSNYANILELLLRLRQCCNHPFLVTSRSDSKKPVDFDILAKRLLEFNCNSTSQSAYVTEAIEALRRGEKLECPICLESADDPVFTPCAHRMCRECLLSSWSDQISGPCPLCRLKLNKTDLINCPFENQFVVTDVEKEWKESTKVSKLLEHLERIQRYRPAEKSIVFSQWTCFLDLLEIALKKKGIGYFRFDGKLQQKNREKVLKEFNESREERVLLMSLKAGGVGLNLTAASNVFMMDPWWNPAVEEQAIMRIHRIGQKRTVMVRRFIVKDTVEERLQQVQAKKQKMISGALTEDEVRSGRIEDLMMLFS | 1155 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele17g0262 | 1155 | CDD | SF2_C_SNF | 982 | 1113 | - | - | |
| Lele17g0262 | 1155 | Gene3D | - | 562 | 791 | IPR038718 | - | |
| Lele17g0262 | 1155 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 803 | 1147 | IPR027417 | - | |
| Lele17g0262 | 1155 | SMART | ring_2 | 917 | 956 | IPR001841 | - | |
| Lele17g0262 | 1155 | ProSitePatterns | Zinc finger RING-type signature. | 932 | 941 | IPR017907 | - | |
| Lele17g0262 | 1155 | SMART | helicmild6 | 1019 | 1102 | IPR001650 | - | |
| Lele17g0262 | 1155 | Pfam | Helicase conserved C-terminal domain | 990 | 1102 | IPR001650 | - | |
| Lele17g0262 | 1155 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 991 | 1151 | IPR001650 | - | |
| Lele17g0262 | 1155 | Pfam | Zinc finger, C3HC4 type (RING finger) | 917 | 956 | IPR018957 | GO:0046872 | |
| Lele17g0262 | 1155 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 910 | 966 | IPR013083 | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Transcription factors information