Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele17g0243 | ATGCAGAGTGTTTTGCCTAAAAATGTTGAAGATGATTGGATCGAGATGATTGGTAACTATACTTGGAAACCTCTAGATGCCTATGCTGCTTTAAAAATGCTTGAAGATAAAGCAAAATCCCAAGAAGCTAAAAATTCTGAGAAAGCTAATATTACAGAAAGTGTTGAAGTTGAAGGGTCTGTAGATGCCTCTGCAGCTGTCAAAATGCTTGACGATGATCAAGAAAAAGCCAAAGACACTGAAAATTCTGAGGAAGCTAATATTACAGAAGGTGTTGAAGTTGAAGGGTCTTTAGATGCCCCTGCAGCTGTCAAAATGCTTGAAGATGATCAAGCAAAAGCAAAAGCCAAAGACACTGAAAATTCTGAGGAAGCTAATATTACAGAAGGTGTTGAAGTTGAAGGGTCTTTAGATGCCTCTGCAGCTGTCAAAATGCTTGAAGATGATCAAGCAAAATCCAAAGACACTGAAAATTCTGAGGAAACTAATATTAAAGAAGGTGTTGAAGTTGAAGGGTCTGTAGATTCCTCTGCAGCTGTCAAAGTGCTTGAGGATCAAGCAAAACCCAAAGACACTAATAAATCTGAGGAAACTAATATCACACAAGCTTATGATTGGCCATTGTCAGATGACTCTGAGCGTGCAGAACTTCTTGAGAAAATTCCTGAAGAATTTAAAACGCTTAATAGACGCAAATGTCTGGCTGCTAGTCATCTTAACAATGTCATCGAATTTTCCATGCATTGGATAGAGGAACTCGCTAATCGATCTAAGCATATGAACCAACATTTAGACCTATCACCAACATCTTCTTCTGGTGTGCCTGTGCATGATGATGATAAAGTCAAAGACCATGCTAAAAAACAAGAAGAAGATGAATTGGGACTACGTGTAAAGGAGTTAGAACAAGAGACAACAGAACTTCTACAAAAACTTCAGAATCCGGAGTTTAATTGA | 957 | 0.3814 | MQSVLPKNVEDDWIEMIGNYTWKPLDAYAALKMLEDKAKSQEAKNSEKANITESVEVEGSVDASAAVKMLDDDQEKAKDTENSEEANITEGVEVEGSLDAPAAVKMLEDDQAKAKAKDTENSEEANITEGVEVEGSLDASAAVKMLEDDQAKSKDTENSEETNIKEGVEVEGSVDSSAAVKVLEDQAKPKDTNKSEETNITQAYDWPLSDDSERAELLEKIPEEFKTLNRRKCLAASHLNNVIEFSMHWIEELANRSKHMNQHLDLSPTSSSGVPVHDDDKVKDHAKKQEEDELGLRVKELEQETTELLQKLQNPEFN | 318 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 37 | 97 | - | - | |
| Lele17g0243 | 318 | PANTHER | UBIQUITIN SPECIFIC PROTEINASE | 1 | 310 | - | - | |
| Lele17g0243 | 318 | Coils | Coil | 291 | 311 | - | - | |
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 148 | 177 | - | - | |
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 276 | 297 | - | - | |
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 110 | 134 | - | - | |
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 263 | 297 | - | - | |
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 110 | 124 | - | - | |
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 68 | 85 | - | - | |
| Lele17g0243 | 318 | Pfam | Protein of unknown function (DUF629) | 174 | 270 | IPR006865 | - | |
| Lele17g0243 | 318 | Pfam | Protein of unknown function (DUF629) | 1 | 48 | IPR006865 | - | |
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 148 | 168 | - | - | |
| Lele17g0243 | 318 | MobiDBLite | consensus disorder prediction | 37 | 51 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele17g0243 | Lele-ChrLele17 | 14670122 | 14672689 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele17g0243 | 137 | 270 | C2H2 Transcription Factor Family | AT3G47890 | 39.161 | 4.69e-16 | 77.4 |