Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0236 ATGGTTTGCCGAACACCCCAAATACTGTTATCTGATATTGATAAAAACCCGAACACCTGTAAACCTGGATTTCCGTGTAAATCCAAGAATGTTGGTGCACGCAATCCTTGCAGTCCATGGGCATTTGAAAGAAGGTTGAAGTTAATTCAGAGTTATGGGTTTTCCAAAGATGAGAGCTTACAAATGTTCAGAAGAGATCCATTTCTGCTTCAATCTGCAGCTGAGAAGAAACTGAAGTTTGGATTTGAATTCTTCTTGAATGTAATGCTATCTAAGTCAGTGCTTGTTCAAAGACCTATGATTTTGATGTATAGCATGGAAGATAGGGTGATTCCTCGGTACAGAATTTTGCAGCTGTTAATCGCTGAAAATTTACTTGAGAGGAATCCAAGTTTCGTTGAAATGTTAGAAATGCGTGAGGATATATTCTTGAAGAAGTATATTTTGAAGTTCAGATATGAAGCAGAGACTTTATTAGTGGCTTATGAAAATCGCCATCTTGAAGGTTTTTCTTGA 516 0.3721 MVCRTPQILLSDIDKNPNTCKPGFPCKSKNVGARNPCSPWAFERRLKLIQSYGFSKDESLQMFRRDPFLLQSAAEKKLKFGFEFFLNVMLSKSVLVQRPMILMYSMEDRVIPRYRILQLLIAENLLERNPSFVEMLEMREDIFLKKYILKFRYEAETLLVAYENRHLEGFS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0236 171 Pfam mTERF 43 143 IPR003690 GO:0003690|GO:0006355
Lele17g0236 171 PANTHER CGI-12 PROTEIN-RELATED 38 150 IPR003690 GO:0003690|GO:0006355
Lele17g0236 171 Gene3D Transcription termination factor 3, mitochondrial 32 153 IPR038538 -
Lele17g0236 171 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Lele17g0236 171 SMART mt_12 60 91 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0236 Lele-ChrLele17 14588393 14588908 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele17g0236 mTERF 6.5e-13 No_clan