Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0224 ATGATCCGATTTCAGTTTCTCCGTTCACATTTATTATGTCTGCTAGTTTCAGTTTCTTGTATGCTTATTATTGCTTGTTTGGGAGACAATGCCGACATAGCTGCGCAATTGAACGATGATGTTCTTGGTCTGGTAGTGTTTAAATCCGACCTTAATGACCCTTCTGGTCATCTTTCTTCATGGAATGAGGATGATTTAAGTGCTTGCTCGTGGCGGTTCGTTCAGTGTAATCCGGAGACCGGGAGAGTTTCCGGTATCTCACTTGATGGATTAGGTTTATCTGGGAAAATAGGAAGAGGTCTTGAGAAGTTGCAGTATCTCAAGGTATTGTCACTGTCTCATAACAACATAACTGGAAGTATCAGTCCTTCACTTTCTCTTTCAAACACTCTTCAAAGCTTAAACCTCAGTCACAATAGCTTATCTGGTTCTATTCCCAGTTCTTTTGTGAATATGGCTTCAATGAAATCTCTTGATTTATCAGAGAATTCATTCTCAGGACAAATCCCAGATAGCTTGTTTCAGAACTGTTTTTCCCTTCTTCATCTTTCTCTTGCTAGGAACATGTTTGAAGGCTCAATTCCTAGTACAATCTCGAGATGTTCCTTATTGAACAGCCTCGATCTTTCAAAAAATCAGTTCGGTGGTAGTGTAGACTTCAATGGGATTTGGTCTTTGACAAGGCTTAGGACTTTGGATCTGTCAAATAATGCCTTGTCTGGAAATTTGCCTCCCGGAATATCATCCATACATAACTTGAAAGAGATGAAACTACAAGGTAATCACTTTTCAGGACCATTACCTTCTGATATTGGATTCTGCTTGCATTTGAATACGTTGGATTTTAGTGATAATCTGTTCAATGAAGCACTTCCAGAATCACTTGGGAGACTTCATTTTTTGAACTTTTTCAAGGCATCAAATAATTTGTTAACCAATGAAATCCCTCAGTGGATTGGTAACATGGCGAGTCTGGAATACCTTGATCTCCCAGACAATCAGTTATCCGGGAACATCCCGGATTCAATCGGCGATTTGAGATCTCTGAGTTATCTCGGTCTCTCGAACAACAAGCTTGTGGGAAACATTCCATCATCATTGGTTTCATGTACTAAGCTGTCATCAATTCATCTCAGAGGTAATGGTTTCAATGGTAACATACCAGAGGGACTGTTTGGCTTGGAATCATTAGAGGAAATAGATCTTTCTCATAATGGGTTAAAGGGTGAAATCCCAGAAGAAATTATTCATGCTTCTAAACTAAAATATTTGAATCTATCTTGGAATGATTTTCACTCCCAAATGTCCCCAGAGTTGGGTATGCTTCAGAATCTGACAGTTCTAGATCTTCAGAGCAATTCACTATATGGTTCAATTCCAGAGGATTTATGTGATTCAGGCAATTTGGCTTTTCTTCAACTTGATGGAAACTCATTGAATGGTCCTATCCCAGATAAGATTGGAAATTGTTCATCTCTTTTCTTGCTGAGCTTGTGTCACAATAACTTGACTGGCTCAATTCCTAAGTCCATGTCAAAGCTTAAAGAGCTCAAAGTTCTGAAATTGGAATTCAATGAACTGAGTGGAGAGATACCACAGGATCTTGGAATGCTGCAGAATCTTCTTGCTGTGAATATATCATATAACAGACTCACAGGAAGGCTTCCTAGTGGTAACATATTTCAGAACTTAGACAAAAGTTCCTTAGAAGGAAACTTGGGTCTTTGTTCACCCATATTGAAAGGGCCGTGTAAGATGAATGTGCCAAAGCCACTGGTTCTTGACCCAAATGCTTATAACAACCAAATGGGTAGGCCAAGGAATGAATCTTCCACGAGTAAGCCGAGCATCATGCATCGCCACCGGTTCCTGAGTGTTTCAGTTATTGTCACAATTTCTGCGGCTTTTGTGATCATATTGGGTGTGATTGCTATTAGCCTTTTGAATGTTTCTGTGAGGAGAAGGCTGGCATTTGTTGATAATGCTTTGGAAAGCATGTGTTCAAGCTCTTCAAGATCAGGAAGTCCGCCTACTGGAAAGCTCATTTTGTTCGATTCGGGCCTGTCTTCGCTCGACTCGATCAGCAACCCGGAAAACTTGCTGAGCAAGGCATCCGAGTTAGGAGACGGAGTGTTTGGAACTGTTTACAAGGTTCCTTTGGGATCACAGGGTAGAATGGTGGCAATCAAGAGGCTTGTGACTTCAAACCTAGTCCAGTATCGTGAAGACTTTGATAGGGAAGTAAGAATCTTAGGGAAAGCAAGGCACCCTAATCTAATAGCATTGAAAGGGCACTATTGGACTCCTCAATTGCAACTTTTGGTCACAGAATATGCACCGAATGGTAGCTTGCAATCCAAGCTACACGACCGTCTTCTTTCATCTCCACCTCTCTTGTGGCCTATTAGGTTCAAAATTTTGCTTGGAACAGCAAAAGGGTTCGCGCATTTACACCACTCATTTCGCCCGCCAATCGTTCACTACGACCTGAAGCCAAGCAACATTCTACTCGACGAGAACTTCAATCCAAAGATCTCAGATTTCGGGCTGGCCCGTCTCCTGACAAAGCTAGACAGGCACGTGATGAGCAACAGGTTTCAGAGCGCATTAGGATATGTAGCACCAGAATTGGCATGCCAGAGCTTGAGGGTGAATGAGAAGTGCGATATCTACGGCTTTGGGGTGATGATTCTCGAGCTCGTGACGGGAAGGAGACCGGTCGAATACGGAGAAGACAATGTCGTGATACTGAAAGACCATGTCAGATTGATGCTTGAGCAAGGAAATGTGTTGGAATGTGTGGATCCAAACATGAGTGAGTATCCTGAAGATGAAGTTCTCCCAGTTCTGAAGCTTGCATTGGTATGCACCTCACAGATACCTTCAAGCAGGCCTTCAATGGCAGAAGTAGTTCAAATTCTGCAGGTCATCAAAACTCCTGTTCCTCACAGAATGGAAATGTTTTAG 2967 0.4196 MIRFQFLRSHLLCLLVSVSCMLIIACLGDNADIAAQLNDDVLGLVVFKSDLNDPSGHLSSWNEDDLSACSWRFVQCNPETGRVSGISLDGLGLSGKIGRGLEKLQYLKVLSLSHNNITGSISPSLSLSNTLQSLNLSHNSLSGSIPSSFVNMASMKSLDLSENSFSGQIPDSLFQNCFSLLHLSLARNMFEGSIPSTISRCSLLNSLDLSKNQFGGSVDFNGIWSLTRLRTLDLSNNALSGNLPPGISSIHNLKEMKLQGNHFSGPLPSDIGFCLHLNTLDFSDNLFNEALPESLGRLHFLNFFKASNNLLTNEIPQWIGNMASLEYLDLPDNQLSGNIPDSIGDLRSLSYLGLSNNKLVGNIPSSLVSCTKLSSIHLRGNGFNGNIPEGLFGLESLEEIDLSHNGLKGEIPEEIIHASKLKYLNLSWNDFHSQMSPELGMLQNLTVLDLQSNSLYGSIPEDLCDSGNLAFLQLDGNSLNGPIPDKIGNCSSLFLLSLCHNNLTGSIPKSMSKLKELKVLKLEFNELSGEIPQDLGMLQNLLAVNISYNRLTGRLPSGNIFQNLDKSSLEGNLGLCSPILKGPCKMNVPKPLVLDPNAYNNQMGRPRNESSTSKPSIMHRHRFLSVSVIVTISAAFVIILGVIAISLLNVSVRRRLAFVDNALESMCSSSSRSGSPPTGKLILFDSGLSSLDSISNPENLLSKASELGDGVFGTVYKVPLGSQGRMVAIKRLVTSNLVQYREDFDREVRILGKARHPNLIALKGHYWTPQLQLLVTEYAPNGSLQSKLHDRLLSSPPLLWPIRFKILLGTAKGFAHLHHSFRPPIVHYDLKPSNILLDENFNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILELVTGRRPVEYGEDNVVILKDHVRLMLEQGNVLECVDPNMSEYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPVPHRMEMF 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0224 988 Pfam Leucine rich repeat 307 359 IPR001611 GO:0005515
Lele17g0224 988 Pfam Leucine rich repeat 372 431 IPR001611 GO:0005515
Lele17g0224 988 Pfam Leucine rich repeat 106 164 IPR001611 GO:0005515
Lele17g0224 988 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 779 983 - -
Lele17g0224 988 Pfam Protein kinase domain 703 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0224 988 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 695 778 - -
Lele17g0224 988 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 37 197 - -
Lele17g0224 988 SUPERFAMILY RNI-like 221 556 - -
Lele17g0224 988 Gene3D Ribonuclease Inhibitor 297 587 IPR032675 -
Lele17g0224 988 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 198 292 - -
Lele17g0224 988 SUPERFAMILY Protein kinase-like (PK-like) 692 978 IPR011009 -
Lele17g0224 988 FunFam Inactive leucine-rich repeat receptor-like protein kinase 395 587 - -
Lele17g0224 988 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 294 387 - -
Lele17g0224 988 Gene3D Phosphorylase Kinase; domain 1 701 782 - -
Lele17g0224 988 CDD STKc_IRAK 707 975 - -
Lele17g0224 988 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lele17g0224 988 SMART LRR_sd22_2 442 465 - -
Lele17g0224 988 SMART LRR_sd22_2 394 417 - -
Lele17g0224 988 SMART LRR_sd22_2 226 255 - -
Lele17g0224 988 SMART LRR_sd22_2 104 127 - -
Lele17g0224 988 SMART LRR_sd22_2 322 348 - -
Lele17g0224 988 SMART serkin_6 701 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0224 988 ProSiteProfiles Leucine-rich repeat profile. 106 128 IPR001611 GO:0005515
Lele17g0224 988 Gene3D Transferase(Phosphotransferase) domain 1 783 985 - -
Lele17g0224 988 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Lele17g0224 988 SMART LRR_typ_2 442 466 IPR003591 -
Lele17g0224 988 SMART LRR_typ_2 514 538 IPR003591 -
Lele17g0224 988 SMART LRR_typ_2 152 176 IPR003591 -
Lele17g0224 988 SMART LRR_typ_2 104 128 IPR003591 -
Lele17g0224 988 SMART LRR_typ_2 346 370 IPR003591 -
Lele17g0224 988 SMART LRR_typ_2 226 250 IPR003591 -
Lele17g0224 988 SMART LRR_typ_2 394 418 IPR003591 -
Lele17g0224 988 ProSiteProfiles Protein kinase domain profile. 701 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele17g0224 988 PRINTS Leucine-rich repeat signature 226 239 - -
Lele17g0224 988 PRINTS Leucine-rich repeat signature 131 144 - -
Lele17g0224 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Lele17g0224 988 Gene3D Ribonuclease Inhibitor 195 290 IPR032675 -
Lele17g0224 988 Gene3D Ribonuclease Inhibitor 38 194 IPR032675 -
Lele17g0224 988 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Lele17g0224 988 PANTHER OS05G0588300 PROTEIN 207 343 - -
Lele17g0224 988 SUPERFAMILY L domain-like 37 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0224 Lele-ChrLele17 14430243 14433665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0224 28 985 Receptor kinase-like Gene Family AT3G28040 62.563 0.0 1184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lele17g0224 Pkinase 3.6e-43 CL0016