Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0221 ATGGAAACCAACCTGCAAATTGAAGATGGAACAGCAGCACCGGTTAAAGTAAAATCTAAACAAAAAGCAAACAAGAGAATAGGAAGAAAAGAAACCAGTGAGACCAGCAGATCAGCAAACATGGAAATTATATATATAACAAAAGAAACTCAAAAGAAGAACAACAAGAGACAGAGGACAGTGAAGGATAGCCACCAACGTTTAGGATTTCGCCTTAACGGTGACAGAGCTACGAGGAGCAAGGCGAGAATAAACCCTTGTTGTCGGAGTTCCCTAATCGTGACTGACTACGATGCAAATGCAATGCTGACCGGCAGAGAAAGCTTGATTCGATTGGTCGGCAAACGCAGGCGCTTTCTTCCCAATCGTCAGTCTCTCTTCTCCAATCCAGAACAGATCTCTTTGAATCTGTGCAATGACAATGATGGAAAAATTTGCTTGGGAAAGTCTGCCGAACAACCTCAGGAAGTTAATTTGAACGAATTTAAATCTGTTGGGGATAAGATTGAGAATAATACCTCTCATGGTGAGATAGCTTGCCCAGTTTGTGGCTGTAAGATTCATGGGGATAACTACGAAGTCAATTCTCATCTTGATGTATGTCTCTCTCGAAGAACCAAGCGAAAACTCACTCAATGCACCCTCCTTCAGTTGAACTTCAGCCAAACATTAAAAGTGCAAAATATTCCTGGTGACTCATTGAAGTCAGAAAATGCTTTGGTCCTGAGAAATTGTAATAACCATGTTCCACAGAATCCAAGTAATGTTTTACCTACTCTTGCGGCCAGGGAAAAAAGTGACAAAAAGTGTAAACTTACTCAAAATCTGGACCATAATCACAATAGTTGTAGCAAAATTGGAAGCTCATCCTTGTCATCTAAGGATGAGCTGCCAAAATCAGAGCTGACTAATTGTAGGTCCACCATATCTGGGGTGACACTTGAAACTTTTTTAGTTGGTCGTAGATATACTGGTCATGAGGAGATACATCCTGGTGATACCTTCTCTCTTTTGAGGGACCCTCACAATGTTAATGATTTCAATGCCATTAAGGTTGTTTCTGCTGATTCTGGAAGTTTTAAATTATTTGGTTTCCTCTCTCGTGATCTGGCACAATATCTATCACCTCTTATTGACAATTATGGCCTCATATTTGAGGGACTTATCACTTCTGTTCCAGAACATTCTCTTGATGCTGTTCCAATTCAAATTGTATGCCAGAGGGACTTTGAAAGTAGGCTTGACGATGAAACGTTCAAATGTTTATGGGAAAATGCTCAGCATGTGGTTGAGATCAGAAGGAACAATCCACCTTCTGTGAAGTATCAGCTCAATTTTTGTCTTATATTGCAGGAGGTGTTGAGAAGTAATTTTCACCTTTTAACTGATGATGAAAAAGAGTATCTAGAGTTATTCACTATGCTCTCCAATGATAGTCAGAGACTTTTTATCCGGCTATACTCTAGAAAAGGGCCTTGGTTTCGCATGTCTTGTATATCCTATACTGAAATAATAGATGTTGAAAGAGCAGTGAAGGGACTTGCTGACAAAGGATATGTATGTTATGTTGAAGATGGAGATGACATATGTGAAAGTGAGATGAAAGATATTTTGAATACTCTTACAGTCTCCGAGCTACGTGAAATTTGGTGTATTCTTAAAAAGAATTGCAATCGTGGGTTGAGAAAGCAAGATCTTGTCGCATGTCTTCTTTCTACATACGCAGATGGACTGTGGCCATGCCTATCAACAAAGGTTTTGGATAGAACTGGCATCTGTATCAAAATATCTTCAAAAGCTGAAACTCTCATGTGGCGTGCTGAGAGGCTTTTCTTCTTAAATGGAGAGCAGGATCTCGCAACGTTTCTACTTGTTGACATGGGAAAAGTCAAGTATCCAACTTACAATTGCATAATATCAGAACCGATTTTCTCTAATCGCAGTGACCTGCTTTTGTACGAGGAGGCCATTGAAGTGGCTCAGATAATGGATGAAGCTCTTGATGCACACAACAATGAATTCATATTGAAATGCATAAAGATTGCTGAATCCCATGTATCTACTGTTTTGCCGATCCAGCACTCAACTTCTGAATCAGTAGCTGCATCTCGTCATTTATATACTGCATCATGGGTACATTCCAAAGTTGTCACATTAGGGATTTCATTTCTTGAGCAAGAGCGCAGGTACATTGATGCAATTGACTTACTGAAGCAGCTGCTGAGTTTTTTCATGCATGACGTAAGACGAGGATATTGGACACTGAGGTTATCTGTTGACTTGGAGCACCTAGGCTATACTGAAGAGAGCCTTCAGGTAGCTGAAAATGGGTTGCTTGATCCATGGATACGTGCTGGCTCAAGAGTGGCACTTCAAAGACGGATTCTTCGCTTAGGAAGACCACCAAGGAGATGGAAAGTTCCTAGCTTTTCAAAGTCCATAAAGAGGGAGATCACTGAGGTTTTTGTTCAAGGGAGACCTTTGAATTCTGAATTGGGTGCAAAGAACAGGTTCTATAATGAAGAGGGGGAGCAGTGTGGAGTGGAACAGCTTGCTTTGCATTATTACGCTGGGATGAGAGGCGGATGGCAGGGTGTTCATACAGAAAGTGGGATATGGTTGACCATCTTTGGCCTTCTTATGTGGCATATCATATTTGCAGATGTACCAAATGTCTTCTACAATAGATTTCAGGTTGCACCCTTGGATCTCGGCACGGATGGATTTTATACAGCGAGAAAGGGTATCATAGAATCTCATCTTCAGCCAATTAATGATGGCATGGCCGAGGAATTACTCATAAAATCATGGGAAACACATTATGGTACAAGGTGCAGAGGAGTCAATTGGGATCGCCATTCTTTAGATGAACTTCGTGCTGCTGTTGCGTGTGTCGGAGGCCCCTGTTTGGCCTCTCTTTGCAGACTATTTGCTCAAGACTATCATAGCTGGTCCAGTGGAATGCCAGATTTACTGCTATGGCGTTTCCATGGGGAATACAGTGGTGAAGCCAAGCTTGTTGAAGTTAAAGGTCCCAAAGATCGCCTCTCCGAACAGCAACGAGCATGGCTGCTTCAGCTTATGGATTGTGGATTCAAGGTAGAGGTTTGCAAGGTGAAGCCATGA 3126 0.4152 METNLQIEDGTAAPVKVKSKQKANKRIGRKETSETSRSANMEIIYITKETQKKNNKRQRTVKDSHQRLGFRLNGDRATRSKARINPCCRSSLIVTDYDANAMLTGRESLIRLVGKRRRFLPNRQSLFSNPEQISLNLCNDNDGKICLGKSAEQPQEVNLNEFKSVGDKIENNTSHGEIACPVCGCKIHGDNYEVNSHLDVCLSRRTKRKLTQCTLLQLNFSQTLKVQNIPGDSLKSENALVLRNCNNHVPQNPSNVLPTLAAREKSDKKCKLTQNLDHNHNSCSKIGSSSLSSKDELPKSELTNCRSTISGVTLETFLVGRRYTGHEEIHPGDTFSLLRDPHNVNDFNAIKVVSADSGSFKLFGFLSRDLAQYLSPLIDNYGLIFEGLITSVPEHSLDAVPIQIVCQRDFESRLDDETFKCLWENAQHVVEIRRNNPPSVKYQLNFCLILQEVLRSNFHLLTDDEKEYLELFTMLSNDSQRLFIRLYSRKGPWFRMSCISYTEIIDVERAVKGLADKGYVCYVEDGDDICESEMKDILNTLTVSELREIWCILKKNCNRGLRKQDLVACLLSTYADGLWPCLSTKVLDRTGICIKISSKAETLMWRAERLFFLNGEQDLATFLLVDMGKVKYPTYNCIISEPIFSNRSDLLLYEEAIEVAQIMDEALDAHNNEFILKCIKIAESHVSTVLPIQHSTSESVAASRHLYTASWVHSKVVTLGISFLEQERRYIDAIDLLKQLLSFFMHDVRRGYWTLRLSVDLEHLGYTEESLQVAENGLLDPWIRAGSRVALQRRILRLGRPPRRWKVPSFSKSIKREITEVFVQGRPLNSELGAKNRFYNEEGEQCGVEQLALHYYAGMRGGWQGVHTESGIWLTIFGLLMWHIIFADVPNVFYNRFQVAPLDLGTDGFYTARKGIIESHLQPINDGMAEELLIKSWETHYGTRCRGVNWDRHSLDELRAAVACVGGPCLASLCRLFAQDYHSWSSGMPDLLLWRFHGEYSGEAKLVEVKGPKDRLSEQQRAWLLQLMDCGFKVEVCKVKP 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0221 1041 SMART HIRAN_2 311 408 IPR014905 GO:0003676|GO:0008270|GO:0016818
Lele17g0221 1041 SMART VRR_NUC_a_2 924 1041 IPR014883 GO:0016788
Lele17g0221 1041 Gene3D - 970 1040 IPR011856 GO:0003676
Lele17g0221 1041 Pfam HIRAN domain 313 395 IPR014905 GO:0003676|GO:0008270|GO:0016818
Lele17g0221 1041 Pfam VRR-NUC domain 926 1040 IPR014883 GO:0016788
Lele17g0221 1041 MobiDBLite consensus disorder prediction 1 39 - -
Lele17g0221 1041 Gene3D Classic Zinc Finger 177 205 - -
Lele17g0221 1041 SMART c2hc_5 177 202 IPR006642 GO:0003677|GO:0006281
Lele17g0221 1041 Gene3D - 305 420 - -
Lele17g0221 1041 PANTHER FANCONI-ASSOCIATED NUCLEASE 1 105 1041 IPR033315 GO:0004518|GO:0036297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0221 Lele-ChrLele17 14375420 14390572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0221 285 415 RAD5 or RAD16-like Gene Family AT5G05130 26.429 9.71e-06 47.8