Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0217 ATGGGTTGTAGTAGTGGTAAAGGGTTTTTCGTGGGCATGGTGCTTGGGATAGTTTTCAGTTCTATGGTGGCTTCTTGTGCTGCAAACTTCTTCCAAGACACTGAGATCACATGGGGTGGTGATCGTGGGAAGATATTCAATGGAGGTCAGCTTCTTTCTCTTTCTCTGGATAAGTTCTCTGGCTCTGGCTTCCAATCCAAGAAACAGTTCCTTTTTGGGAGGATCGACATGGACATCAAGCTTGTTCCTGGCAATTCTGCTGGCACCGTCACCACTTTCTACATTGACTTCGAGTTCTTGGGAAATGTGAGTGGGGATCCTTATATTCTACATACCAATGTCTTCTCTCAAGGCAAAGGCAACAGAGAGCAACAGTTCTATCTCTTGTTCGACCCTACCAGAAACTTCCACAAGTACTCCATCCTCTGGAAGCCACAACACATTATATTCTTGGTAGACGATATTCCCATTAGGGTTTTCGAGAACGTGGAAGCTAAAGGAGTTCCCTTCTCTAAGGACCAGGCCATGAGAATGCATTCGAGCCTTTGGAATGCTGATGACTGGGCAGCCACTAGGGGTGGTTTGGTTAAGACAGATTGGTCTAAGGCTCTTTTCACTGCTTATTATCGAAACTTCAAAGTCACAGATCTCGTGTCTTCTTCTTCATCTTCTTCATCAAACTCATTTTCTGATTCTAAAGAGCAAAGCGATTATGAGGTTGATGCTAATGGAAGAAGAAGAGTGAGATGGGCTCAGAAGTACTTCATGATATATAACTATTGCTCAGATCTCAACCGATTCCCTCAAGGCCTCCCTCCTGAATGCAAACGTTCCAGCTTCCAAATCTTTTTCATAATGAGTTTGCATCGTTTTGGAGCATTGCATTATCTCAAATTGAATCATGCATTTTCGTATTCTCCGATTAATTTTTCCAGATCCTTTCTATGTCTTTTCTCTACTGTTGTTTCTTCCCCAACTCAACCCTCAACTGAATACGTTCCCATCATTGATTATCTAAGCACCAACTTCAAGTTATCCAAATCTCAATCCGTCAGTATCTCAAAACGACTCTCTAAGACTAGGTGCCTTCAGCATCCAGGGACCGTGCTTAATTATTTTAAACATATTGGACTTTCTGAATCGCAGATTCGATCTATGATTACTCTTAAACCCCACATATTGTTCTCATGTGTGGATAAAACCCTAAAGCCCAAAATTGAGTACCTTGAGCTTCTAGGGTTTCAGGGTTCTAAGTTGGGCGAGTTTCTCTCAAAGAATGCATCTCTTTTGATGTGTAATTTGAATAAAACGGTGGTGCCCTCTATGGAGTTTGTTAGGAAACTTGTTAATAATGAGGAAGATTTCATTAAGGTGCTTAAACGATATGGGAGTTACATAATCCCAAACCATCAAAAGGTTTTGCGCAGTGCTGCTTTCTTCGAGAGTTGTGGGATCATTGGGTCTCGGCTTTCATTTTTACTGACACACGATGCTCGTCTTTTTGTAACTCGAGAGTCCCTGCTTCGAGACTATGTTTCACGAGCTGTAAACATGGGTTTCTCCATGAACTCGGGAATGTTTGTATATGTACTCAGGACAATTAGTGGTATGAGCATTGTTAAGTTCAACAGGAAGTTAGAGTTAATTCAGAGCAGTGGGTTTTCAAAACATGAGACCATGCAAATGTTTAGAAGAGCTCCGGGGTTGCTTAGCAAATCTGAGAAGCGTCTAGAACTTGGAATTCAAGTGTGCTTGGATACAATCATGCTGCCTAAGTCACTACTGGTTAATAACCCTGTGATTTTGATGATGAGCATGGAGAAGAGGGTTATTCCTCGATGGAGGGTTCTGCAACTGCTAATCTCAAAAAAATTACTCATGAAGAATCCAAGTTTTCTTCTGGTTCTTCAATTGCAGGAGCAGAAATTCTTGGAGAAGTATGTTTCCAAGTTTAGAGATAATGAAGAGGCTTTACTGGAGGCTTACAAGGGCCACTATCTGGAAGATGCTTCTACATAA 2019 0.416 MGCSSGKGFFVGMVLGIVFSSMVASCAANFFQDTEITWGGDRGKIFNGGQLLSLSLDKFSGSGFQSKKQFLFGRIDMDIKLVPGNSAGTVTTFYIDFEFLGNVSGDPYILHTNVFSQGKGNREQQFYLLFDPTRNFHKYSILWKPQHIIFLVDDIPIRVFENVEAKGVPFSKDQAMRMHSSLWNADDWAATRGGLVKTDWSKALFTAYYRNFKVTDLVSSSSSSSSNSFSDSKEQSDYEVDANGRRRVRWAQKYFMIYNYCSDLNRFPQGLPPECKRSSFQIFFIMSLHRFGALHYLKLNHAFSYSPINFSRSFLCLFSTVVSSPTQPSTEYVPIIDYLSTNFKLSKSQSVSISKRLSKTRCLQHPGTVLNYFKHIGLSESQIRSMITLKPHILFSCVDKTLKPKIEYLELLGFQGSKLGEFLSKNASLLMCNLNKTVVPSMEFVRKLVNNEEDFIKVLKRYGSYIIPNHQKVLRSAAFFESCGIIGSRLSFLLTHDARLFVTRESLLRDYVSRAVNMGFSMNSGMFVYVLRTISGMSIVKFNRKLELIQSSGFSKHETMQMFRRAPGLLSKSEKRLELGIQVCLDTIMLPKSLLVNNPVILMMSMEKRVIPRWRVLQLLISKKLLMKNPSFLLVLQLQEQKFLEKYVSKFRDNEEALLEAYKGHYLEDAST 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0217 672 Pfam mTERF 541 644 IPR003690 GO:0003690|GO:0006355
Lele17g0217 672 Pfam mTERF 370 579 IPR003690 GO:0003690|GO:0006355
Lele17g0217 672 Pfam Glycosyl hydrolases family 16 33 202 IPR000757 GO:0004553|GO:0005975
Lele17g0217 672 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 27 275 IPR044791 GO:0004553
Lele17g0217 672 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lele17g0217 672 Gene3D Transcription termination factor 3, mitochondrial 448 654 IPR038538 -
Lele17g0217 672 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 232 275 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Lele17g0217 672 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 4 209 IPR000757 GO:0004553|GO:0005975
Lele17g0217 672 FunFam Mitochondrial transcription termination factor-like 434 654 - -
Lele17g0217 672 Gene3D - 16 280 - -
Lele17g0217 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 277 IPR013320 -
Lele17g0217 672 SMART mt_12 384 415 IPR003690 GO:0003690|GO:0006355
Lele17g0217 672 SMART mt_12 592 626 IPR003690 GO:0003690|GO:0006355
Lele17g0217 672 SMART mt_12 420 451 IPR003690 GO:0003690|GO:0006355
Lele17g0217 672 SMART mt_12 560 591 IPR003690 GO:0003690|GO:0006355
Lele17g0217 672 SMART mt_12 456 486 IPR003690 GO:0003690|GO:0006355
Lele17g0217 672 FunFam Xyloglucan endotransglucosylase/hydrolase 17 277 - -
Lele17g0217 672 CDD GH16_XET 27 275 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0217 Lele-ChrLele17 14341053 14345058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0217 1 278 Glycoside Hydrolase AT4G14130 64.948 3.40e-129 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele17g0217 mTERF 2.4e-21 No_clan