Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0216 ATGAGAAACCGTGAAATAGGGCATTTCATGAGAATGAGTTCACATCGTTGTGGAGCAATGCATTTTATCAAATTAAACCCTTCACTTTCGTATTCTCTGAGTAATTTTCCCAGATCCTTTCTTTCACTGTTTTCTACTGTTGTTTCTCCCCAAACTCAAGCAACCTCAGCGGAACGCATTTCCATCATCGATTACCTAAACGCCAACTTCAAATTCTCCAATGCTCAATCCATCTATGTCTCCAAACGACTTTCTCAGGTTAGGTTCCCTCAACATCCCTTGTCCGTGGTTAATTATTTTAAACATATTGGATTTTCTGAATCACAGATTAACTCTTTGCTTGGTAACCAACCCCAAATATTGTTCTCACGGTTTGAAACCTTGAAGCCGAAAATTGAGTACCTTCAGCTTCAAGGGCTCGAGGGTTCTGAGTTGGGCGAGTTCCTTTCCGAGAATTCGTGTCTTTTGACTTTTAGTTTGAATAGAACAATTGCCCCCCTTATGGAGACTCTTGGGAAATTTGTTTCAAATAAGAAAGATTTTATTAAAGCGCTTCATAGATATGGGTACTGGAAAATCGCACATCCCCGCAGAATTTTGCACAATGCTGCTTTGTTTGAGAGTTGGGGGATCGTTGGATCTCAACTTTCAAGGTTAGTGATACGGCAGCCTTGGCTTTCTTCTGCACCAGAGTCTGTGATTCGAAATTATGTTGCACGGGCTGTAAACATGGGTTTCAATTTAAATTCAAGGATGCTGGTTCATGCAATTATGACGATGGGTAGTTTAAGCATGGAGAAGTTTAACGGAAAGCTTGAGTTGATTCAGAGTTGTGGGTTTTCTGAAGAAGAGGTCACGCAAATGTTTAGAAGAGCTCCAGGGTTGCTTCTCCAATCTGAGAAGAAGCTAAAATTTGGAGTTCATGTGTGCTTGGATAAAATTATGCTGTCAAAGTCACTACTGGTTACTAACCCTGTGATCTTGATGTTAAGCATGGAGAAAAGGGTGATTCCTCGATGGAGGGTATTGCAGCTGCTCATCTCAAAAAATTTACTCAAGAAGAATCCAAGATTTTTTGGAGTGCTAAAATTGCAGGAGAAGAAATTCTTGGAGAAGTATATTTCAAAGTTTAGAGATAATGAAGAGGCTTTACTGGAGGCTTACAAGGGTCACTGTCTATCATCACTTTCTGTTTCACACACTTCTCTGCCGGTTACTTTGGATACTGAAGAATGTGTTTGGATTGAGGAGAACAGAGAGGAAGGGAATTGA 1272 0.4033 MRNREIGHFMRMSSHRCGAMHFIKLNPSLSYSLSNFPRSFLSLFSTVVSPQTQATSAERISIIDYLNANFKFSNAQSIYVSKRLSQVRFPQHPLSVVNYFKHIGFSESQINSLLGNQPQILFSRFETLKPKIEYLQLQGLEGSELGEFLSENSCLLTFSLNRTIAPLMETLGKFVSNKKDFIKALHRYGYWKIAHPRRILHNAALFESWGIVGSQLSRLVIRQPWLSSAPESVIRNYVARAVNMGFNLNSRMLVHAIMTMGSLSMEKFNGKLELIQSCGFSEEEVTQMFRRAPGLLLQSEKKLKFGVHVCLDKIMLSKSLLVTNPVILMLSMEKRVIPRWRVLQLLISKNLLKKNPRFFGVLKLQEKKFLEKYISKFRDNEEALLEAYKGHCLSSLSVSHTSLPVTLDTEECVWIEENREEGN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0216 423 Pfam mTERF 97 234 IPR003690 GO:0003690|GO:0006355
Lele17g0216 423 Pfam mTERF 262 370 IPR003690 GO:0003690|GO:0006355
Lele17g0216 423 Gene3D Transcription termination factor 3, mitochondrial 176 379 IPR038538 -
Lele17g0216 423 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Lele17g0216 423 SMART mt_12 111 141 IPR003690 GO:0003690|GO:0006355
Lele17g0216 423 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Lele17g0216 423 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Lele17g0216 423 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Lele17g0216 423 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Lele17g0216 423 FunFam Mitochondrial transcription termination factor-like 160 380 - -
Lele17g0216 423 PANTHER CGI-12 PROTEIN-RELATED 60 377 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0216 Lele-ChrLele17 14336766 14338037 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele17g0216 mTERF 7.7e-12 No_clan