Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0208 ATGACAGATTATATCGTTTGCAGATTTCAAACACATCCGATATACAAGAGGAACAATATTTCATCTACTTTGCAAACTCAAAACATGAAGACTAAGAAGAGAAAAGTTGAAGACAGTAATCTCTCAAACAACATTATTGATGATTTCTGGCAAATTATTCCAAGTGGATTTAAGTTTTTACCAACAGAACAAGAGTTGATTATGGCATATTTGAGGAAGAAAGTGATGAATGAACCATTAGAACCTAATCTAATTGCTGAAGCTGAGATCTATAAGTACAATCCTGAACAACTATCTAGCAACCATCATAAGAGCAAGAAGACCAATTGGATCATGCGTGAGTATTATTTGGATGGAACTACTCATACCAGAATAAGTCCTTCAGATAGGAAGTTAGATGATTGGGTTCTATGTAAGATTTACAAGAACAATAAGAACTACATGAAGAGCTCTACAAATGAGGAAGCATACTTAGAACCAATTAGAATAGAGCCAATTCAAATGATTTCTTCTTCAAAAATATTGACTCAACTTCAACATGAGCCTGAAAATCACAATACGGATCCAGTTCAGTTGAACCCTCATGCATCATCAGGAATCTCTCATAATCCTTCTTCCAATCCTCCATATTTTAATGAAATCAAAACTGAAATGTCAAGTTTAGATGACGTTTGGAATTCAATAGATCTTGACAACTACTGGGATATGGGAAATAATATATGA 723 0.3375 MTDYIVCRFQTHPIYKRNNISSTLQTQNMKTKKRKVEDSNLSNNIIDDFWQIIPSGFKFLPTEQELIMAYLRKKVMNEPLEPNLIAEAEIYKYNPEQLSSNHHKSKKTNWIMREYYLDGTTHTRISPSDRKLDDWVLCKIYKNNKNYMKSSTNEEAYLEPIRIEPIQMISSSKILTQLQHEPENHNTDPVQLNPHASSGISHNPSSNPPYFNEIKTEMSSLDDVWNSIDLDNYWDMGNNI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0208 240 Gene3D NAC domain 62 103 IPR036093 GO:0003677|GO:0006355
Lele17g0208 240 Gene3D NAC domain 104 149 IPR036093 GO:0003677|GO:0006355
Lele17g0208 240 SUPERFAMILY NAC domain 50 143 IPR036093 GO:0003677|GO:0006355
Lele17g0208 240 PANTHER NAC TRANSCRIPTION FACTOR 56 53 99 - -
Lele17g0208 240 Pfam No apical meristem (NAM) protein 54 102 IPR003441 GO:0003677|GO:0006355
Lele17g0208 240 MobiDBLite consensus disorder prediction 181 211 - -
Lele17g0208 240 ProSiteProfiles NAC domain profile. 53 203 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0208 Lele-ChrLele17 14288478 14290621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0208 40 144 NAC Transcription Factor Family AT1G61110 27.841 3.23e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele17g0208 NAM 1.2e-08 No_clan