Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0180 ATGTTCAGAGGAATTGATGATTCTAAAGATTATATTGCAACAAAGAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGATACCATTTTCCGAGTGGTTGCTGCAATTTTGCATCTTGGAAATATTGAATTTGCAAAAGGGGAGGAAATAGACTCATCTATGCCCAAAGATGAAAAATCTCAATTTCATCTACAAACTGCTGCTGAGCTTTTCCAGTGTGATGCAAAAGCACTAGAAGATTCTCTTTGCAAACGTGCCATTGTTACTCGTGATGAAACAATCACAAAGTCACTGGATCCAGAAACTGCTGCACTCAGCCGAGATGCTTTGGCTAAAATTGTGTACTCAAGATTATTTGATTGGCTGGTGGATAAGATTAATAGTTCCATTAATCAAGACACCTGA 411 0.3844 MFRGIDDSKDYIATKRAMDVVGISSEEQDTIFRVVAAILHLGNIEFAKGEEIDSSMPKDEKSQFHLQTAAELFQCDAKALEDSLCKRAIVTRDETITKSLDPETAALSRDALAKIVYSRLFDWLVDKINSSINQDT 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0180 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 136 IPR027417 -
Lele17g0180 136 PANTHER MYOSIN 4 135 - -
Lele17g0180 136 Pfam Myosin head (motor domain) 3 135 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele17g0180 136 Gene3D Myosin VI head, motor domain, U50 subdomain 24 136 - -
Lele17g0180 136 FunFam Myosin 2 24 136 - -
Lele17g0180 136 ProSiteProfiles Myosin motor domain profile. 1 136 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0180 Lele-ChrLele17 14036975 14037633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0180 4 135 Myosins gene family AT1G04600 80.303 3.11e-70 226