Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0168 ATGGCCTACAATGGATTATCAACAATCTCAGGAAGCGATTCTCGCTTCTCCTACCTCCCAACTTCATCAATTTCTTCCATCAAATCCTTGAAATCTTCCTCCGTTCGATTTCCGTCTCGTCCTCCTTCATTCAAACTGAGAGCTATGGCTGCCGCCGAGCCATTCTCCTCTGGAATGAGCTTCTACGAGCTTCTCGGTATACCCGAATCCGGATCCTTACCCGAAATCAAGAACGCCTACAGGCAGCTCGCCCGCAAGTATCACCCGGACGTGTCGCCGCTGGATCGGGTTAACGAGTTCACCAAGATGTTCATTCGACTCCGTGAAGCCTATGAGACCTTGTCGGATCCTGGACGGAGAGCTCTCTACGACAGAGCGCTTCACTTGGGCTACTCTAATGGCGGAAGCTCCTACGACGATCAGATGAGGGAAATAAAGAAAGGATGGAGAGTGATTTGGGAGGCTCAGTTATCGGAGCTGATGAACAGAACCTACAAGTATGGCGATAGGAGTGAGTCATGGGCAGCTCAAATCCGCCGCAACAGGAATGAAACCTTCACTGAGATTTACAATTAG 576 0.5 MAYNGLSTISGSDSRFSYLPTSSISSIKSLKSSSVRFPSRPPSFKLRAMAAAEPFSSGMSFYELLGIPESGSLPEIKNAYRQLARKYHPDVSPLDRVNEFTKMFIRLREAYETLSDPGRRALYDRALHLGYSNGGSSYDDQMREIKKGWRVIWEAQLSELMNRTYKYGDRSESWAAQIRRNRNETFTEIYN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0168 191 SUPERFAMILY Chaperone J-domain 58 139 IPR036869 -
Lele17g0168 191 CDD DnaJ 61 116 IPR001623 -
Lele17g0168 191 SMART dnaj_3 59 119 IPR001623 -
Lele17g0168 191 Pfam DnaJ domain 61 124 IPR001623 -
Lele17g0168 191 Gene3D DnaJ domain 48 151 IPR036869 -
Lele17g0168 191 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 36 184 - -
Lele17g0168 191 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Lele17g0168 191 PRINTS DnaJ domain signature 119 138 IPR001623 -
Lele17g0168 191 PRINTS DnaJ domain signature 62 80 IPR001623 -
Lele17g0168 191 PRINTS DnaJ domain signature 80 95 IPR001623 -
Lele17g0168 191 PRINTS DnaJ domain signature 99 119 IPR001623 -
Lele17g0168 191 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0168 Lele-ChrLele17 13854285 13855628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0168 56 124 C2H2 Transcription Factor Family AT1G74250 43.836 1.21e-08 52.0